STRINGSTRING
LOC112409615 LOC112409615 LOC112409616 LOC112409616 GATA4 GATA4 TRIM33 TRIM33 SMAD1 SMAD1 LOC112396051 LOC112396051 SMAD6 SMAD6 SMAD3 SMAD3 FOXH1 FOXH1 PAX6 PAX6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC112409615Probable ubiquitin carboxyl-terminal hydrolase FAF-X. (235 aa)
LOC112409616Probable ubiquitin carboxyl-terminal hydrolase FAF-X; Belongs to the peptidase C19 family. (2060 aa)
GATA4Transcription factor GATA-4. (291 aa)
TRIM33E3 ubiquitin-protein ligase TRIM33 isoform X1. (1127 aa)
SMAD1Mothers against decapentaplegic homolog. (465 aa)
LOC112396051Probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1; Belongs to the peptidase C19 family. (2556 aa)
SMAD6LOW QUALITY PROTEIN: mothers against decapentaplegic homolog 6. (422 aa)
SMAD3Mothers against decapentaplegic homolog. (376 aa)
FOXH1Forkhead box protein H1. (360 aa)
PAX6Paired box protein Pax-6 isoform X1. (493 aa)
Your Current Organism:
Neophocaena asiaeorientalis
NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise
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