18 items (Neophocaena asiaeorientalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MEN1	Menin isoform X1. (616 aa)
	PMEPA1	Protein TMEPAI isoform X1. (269 aa)
	ANKRD1	Ankyrin repeat domain-containing protein 1. (319 aa)
	TRIM33	E3 ubiquitin-protein ligase TRIM33 isoform X1. (1127 aa)
	LDLRAD4	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4. (322 aa)
	DDX5	Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (614 aa)
	AXIN1	Axin-1 isoform X1. (866 aa)
	SMAD4	Mothers against decapentaplegic homolog. (599 aa)
	JUN	LOW QUALITY PROTEIN: transcription factor AP-1; Belongs to the bZIP family. (284 aa)
	DROSHA	Ribonuclease 3 isoform X1. (1373 aa)
	PAX6	Paired box protein Pax-6 isoform X1. (493 aa)
	MYOCD	Myocardin isoform X1. (937 aa)
	SMAD3	Mothers against decapentaplegic homolog. (376 aa)
	ZC3H3	Zinc finger CCCH domain-containing protein 3. (980 aa)
	SMAD6	LOW QUALITY PROTEIN: mothers against decapentaplegic homolog 6. (422 aa)
	FOXH1	Forkhead box protein H1. (360 aa)
	SMURF1	E3 ubiquitin-protein ligase SMURF1. (718 aa)
	RANBP3	Ran-binding protein 3 isoform X1. (644 aa)

Your Current Organism:

Neophocaena asiaeorientalis

NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AXIN1	SMURF1	A0A341CKJ9	A0A341BFL6	Axin-1 isoform X1.	E3 ubiquitin-protein ligase SMURF1.	0.701
DDX5	DROSHA	A0A341CRS4	A0A341CAT8	Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	Ribonuclease 3 isoform X1.	0.974
DDX5	LDLRAD4	A0A341CRS4	A0A341CY28	Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4.	0.606
DDX5	PMEPA1	A0A341CRS4	A0A341BTN5	Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	Protein TMEPAI isoform X1.	0.606
DROSHA	DDX5	A0A341CAT8	A0A341CRS4	Ribonuclease 3 isoform X1.	Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	0.974
FOXH1	SMAD3	A0A341B441	A0A341AJT2	Forkhead box protein H1.	Mothers against decapentaplegic homolog.	0.911
FOXH1	SMAD4	A0A341B441	A0A341CF47	Forkhead box protein H1.	Mothers against decapentaplegic homolog.	0.872
FOXH1	TRIM33	A0A341B441	A0A341D0Q0	Forkhead box protein H1.	E3 ubiquitin-protein ligase TRIM33 isoform X1.	0.613
JUN	MEN1	A0A341CB63	A0A341BS97	LOW QUALITY PROTEIN: transcription factor AP-1; Belongs to the bZIP family.	Menin isoform X1.	0.443
JUN	SMAD3	A0A341CB63	A0A341AJT2	LOW QUALITY PROTEIN: transcription factor AP-1; Belongs to the bZIP family.	Mothers against decapentaplegic homolog.	0.729
JUN	SMAD4	A0A341CB63	A0A341CF47	LOW QUALITY PROTEIN: transcription factor AP-1; Belongs to the bZIP family.	Mothers against decapentaplegic homolog.	0.570
LDLRAD4	DDX5	A0A341CY28	A0A341CRS4	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4.	Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	0.606
LDLRAD4	SMAD3	A0A341CY28	A0A341AJT2	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4.	Mothers against decapentaplegic homolog.	0.702
MEN1	JUN	A0A341BS97	A0A341CB63	Menin isoform X1.	LOW QUALITY PROTEIN: transcription factor AP-1; Belongs to the bZIP family.	0.443
MEN1	SMAD3	A0A341BS97	A0A341AJT2	Menin isoform X1.	Mothers against decapentaplegic homolog.	0.881
MEN1	SMAD4	A0A341BS97	A0A341CF47	Menin isoform X1.	Mothers against decapentaplegic homolog.	0.815
MYOCD	SMAD3	A0A341C2R5	A0A341AJT2	Myocardin isoform X1.	Mothers against decapentaplegic homolog.	0.613
PAX6	SMAD3	A0A341C368	A0A341AJT2	Paired box protein Pax-6 isoform X1.	Mothers against decapentaplegic homolog.	0.440
PMEPA1	DDX5	A0A341BTN5	A0A341CRS4	Protein TMEPAI isoform X1.	Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	0.606
PMEPA1	SMAD3	A0A341BTN5	A0A341AJT2	Protein TMEPAI isoform X1.	Mothers against decapentaplegic homolog.	0.872