STRINGSTRING
SFN SFN CD109 CD109 FBLN1 FBLN1 GLI3 GLI3 NF1 NF1 RARG RARG PTCH1 PTCH1 IRF6 IRF6 OVOL1 OVOL1 FGF2 FGF2 FGF10 FGF10 CDKN2C CDKN2C RARB RARB NR2E1 NR2E1 WNT11 WNT11 NFIB NFIB LOC112411691 LOC112411691 FERMT1 FERMT1 KDF1 KDF1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SFN14-3-3 protein sigma; Belongs to the 14-3-3 family. (248 aa)
CD109CD109 antigen isoform X1. (1358 aa)
FBLN1Fibulin-1; Incorporated into fibronectin-containing matrix fibers. May play a role in cell adhesion and migration along protein fibers within the extracellular matrix (ECM). Could be important for certain developmental processes and contribute to the supramolecular organization of ECM architecture, in particular to those of basement membranes. (693 aa)
GLI3Transcriptional activator GLI3. (1587 aa)
NF1Neurofibromin isoform X1. (2841 aa)
RARGRetinoic acid receptor gamma isoform X2. (458 aa)
PTCH1Protein patched homolog 1 isoform X1. (1297 aa)
IRF6Interferon regulatory factor 6 isoform X1. (467 aa)
OVOL1Putative transcription factor Ovo-like 1. (441 aa)
FGF2Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (304 aa)
FGF10Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (208 aa)
CDKN2CCyclin-dependent kinase 4 inhibitor C. (168 aa)
RARBRetinoic acid receptor beta. (311 aa)
NR2E1Nuclear receptor subfamily 2 group E member 1. (385 aa)
WNT11Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (354 aa)
NFIBNuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication. (570 aa)
LOC112411691Retinoic acid receptor beta-like. (329 aa)
FERMT1Fermitin family homolog 1 isoform X1. (677 aa)
KDF1Keratinocyte differentiation factor 1. (398 aa)
Your Current Organism:
Neophocaena asiaeorientalis
NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise
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