STRINGSTRING
FAM76B FAM76B RBM11 RBM11 ZNF830 ZNF830 WBP11 WBP11 MEF2C MEF2C ZC3H18 ZC3H18 SRSF11 SRSF11 SARNP SARNP CPSF6 CPSF6 NRDE2 NRDE2 ZC3H14 ZC3H14 NSRP1 NSRP1 CSNK1A1 CSNK1A1 POLDIP3 POLDIP3 YLPM1 YLPM1 RBM25 RBM25 DDX39B DDX39B NOC3L NOC3L RSRC1 RSRC1 SRSF5 SRSF5 LOC112396941 LOC112396941 HSPB3 HSPB3 YTHDC1 YTHDC1 BASP1 BASP1 RBM23 RBM23 SDCBP2 SDCBP2 RBM15 RBM15 RBM39 RBM39 DGKQ DGKQ RAD54L2 RAD54L2 SRSF6 SRSF6 WTAP WTAP FTO FTO LOC112402078 LOC112402078 RBM14 RBM14 TUT1 TUT1 ZCCHC12 ZCCHC12 LOC112403224 LOC112403224 LOC112404040 LOC112404040 WT1 WT1 NR3C1 NR3C1 ALKBH5 ALKBH5 TRIM69 TRIM69 RBM27 RBM27 EPAS1 EPAS1 SMU1 SMU1 FASTK FASTK HOXA6 HOXA6 DZIP1 DZIP1 FYTTD1 FYTTD1 SRPK3 SRPK3 ZC3H13 ZC3H13 LOC112407121 LOC112407121 SRPK2 SRPK2 SRSF1 SRSF1 SON SON DYRK1A DYRK1A LOC112409253 LOC112409253 PNISR PNISR GLIS2 GLIS2 SRSF2 SRSF2 APEX1 APEX1 HABP4 HABP4 DDX5 DDX5 DDX17 DDX17 SCNM1 SCNM1 PIP5K1A PIP5K1A TCIM TCIM MAML1 MAML1 LOC112413503 LOC112413503 WBP4 WBP4 SRPK1 SRPK1 SRSF3 SRSF3 SRSF10 SRSF10 SRSF4 SRSF4 DDX39A DDX39A SNRNP70 SNRNP70 AKAP17A AKAP17A ELL ELL DHX36 DHX36 SF3A1 SF3A1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
FAM76BProtein FAM76B isoform X1. (339 aa)
RBM11Splicing regulator RBM11. (237 aa)
ZNF830Zinc finger protein 830. (380 aa)
WBP11WW domain-binding protein 11. (641 aa)
MEF2CMyocyte-specific enhancer factor 2C isoform X4. (483 aa)
ZC3H18Zinc finger CCCH domain-containing protein 18 isoform X1. (968 aa)
SRSF11Serine/arginine-rich splicing factor 11 isoform X1. (489 aa)
SARNPSAP domain-containing ribonucleoprotein. (210 aa)
CPSF6Cleavage and polyadenylation specificity factor subunit 6 isoform X1. (537 aa)
NRDE2Protein NRDE2 homolog isoform X1. (1175 aa)
ZC3H14Zinc finger CCCH domain-containing protein 14 isoform X1. (736 aa)
NSRP1Nuclear speckle splicing regulatory protein 1. (559 aa)
CSNK1A1Casein kinase I isoform X1; Belongs to the protein kinase superfamily. (365 aa)
POLDIP3Polymerase delta-interacting protein 3 isoform X1. (421 aa)
YLPM1YLP motif-containing protein 1 isoform X1. (2146 aa)
RBM25RNA-binding protein 25. (843 aa)
DDX39BSpliceosome RNA helicase DDX39B. (507 aa)
NOC3LNucleolar complex protein 3 homolog. (820 aa)
RSRC1serine/Arginine-related protein 53. (334 aa)
SRSF5Serine/arginine-rich splicing factor 5 isoform X1. (274 aa)
LOC112396941LOW QUALITY PROTEIN: WW domain-binding protein 4-like. (283 aa)
HSPB3Heat shock protein beta-3; Belongs to the small heat shock protein (HSP20) family. (149 aa)
YTHDC1YTH domain-containing protein 1 isoform X1. (737 aa)
BASP1Brain acid soluble protein 1. (228 aa)
RBM23Probable RNA-binding protein 23 isoform X1. (458 aa)
SDCBP2Syntenin-2. (291 aa)
RBM15Putative RNA-binding protein 15. (962 aa)
RBM39RNA-binding protein 39 isoform X1. (530 aa)
DGKQDiacylglycerol kinase. (1041 aa)
RAD54L2Helicase ARIP4 isoform X1. (1465 aa)
SRSF6Serine/arginine-rich splicing factor 6. (345 aa)
WTAPpre-mRNA-splicing regulator WTAP. (319 aa)
FTOAlpha-ketoglutarate-dependent dioxygenase FTO isoform X1. (505 aa)
LOC112402078RNA-binding protein 4 isoform X1. (363 aa)
RBM14RNA-binding protein 14 isoform X1. (669 aa)
TUT1Speckle targeted PIP5K1A-regulated poly(A) polymerase. (872 aa)
ZCCHC12Zinc finger CCHC domain-containing protein 12. (403 aa)
LOC112403224A-kinase anchor protein 17B. (548 aa)
LOC112404040A-kinase anchor protein 17B-like. (355 aa)
WT1Wilms tumor protein isoform X1. (450 aa)
NR3C1Glucocorticoid receptor isoform X1. (782 aa)
ALKBH5RNA demethylase ALKBH5. (399 aa)
TRIM69E3 ubiquitin-protein ligase TRIM69. (464 aa)
RBM27RNA-binding protein 27 isoform X1. (1059 aa)
EPAS1Endothelial PAS domain-containing protein 1 isoform X1. (871 aa)
SMU1WD40 repeat-containing protein SMU1 isoform X1. (513 aa)
FASTKFas-activated serine/threonine kinase. (542 aa)
HOXA6Homeobox protein Hox-A6. (233 aa)
DZIP1Zinc finger protein DZIP1 isoform X1. (856 aa)
FYTTD1UAP56-interacting factor. (317 aa)
SRPK3SRSF protein kinase 3. (599 aa)
ZC3H13Zinc finger CCCH domain-containing protein 13 isoform X1. (1676 aa)
LOC112407121LOW QUALITY PROTEIN: RNA/RNP complex-1-interacting phosphatase-like. (219 aa)
SRPK2SRSF protein kinase 2 isoform X1. (717 aa)
SRSF1Serine/arginine-rich splicing factor 1 isoform X1. (248 aa)
SONProtein SON isoform X1. (2390 aa)
DYRK1ADual specificity tyrosine-phosphorylation-regulated kinase 1A isoform X4. (801 aa)
LOC112409253LOW QUALITY PROTEIN: RNA/RNP complex-1-interacting phosphatase-like. (253 aa)
PNISRArginine/serine-rich protein PNISR isoform X1. (814 aa)
GLIS2Zinc finger protein GLIS2. (524 aa)
SRSF2Serine/arginine-rich splicing factor 2. (221 aa)
APEX1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (318 aa)
HABP4Intracellular hyaluronan-binding protein 4. (353 aa)
DDX5Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (614 aa)
DDX17Probable ATP-dependent RNA helicase DDX17 isoform X1; Belongs to the DEAD box helicase family. (652 aa)
SCNM1Sodium channel modifier 1. (230 aa)
PIP5K1APhosphatidylinositol 4-phosphate 5-kinase type-1 alpha isoform X1. (549 aa)
TCIMTranscriptional and immune response regulator. (106 aa)
MAML1LOW QUALITY PROTEIN: mastermind-like protein 1. (983 aa)
LOC112413503Zinc finger CCHC domain-containing protein 18-like. (402 aa)
WBP4WW domain-binding protein 4 isoform X1. (377 aa)
SRPK1SRSF protein kinase 1. (639 aa)
SRSF3Serine/arginine-rich splicing factor 3. (164 aa)
SRSF10Serine/arginine-rich splicing factor 10 isoform X1. (262 aa)
SRSF4Serine/arginine-rich splicing factor 4. (485 aa)
DDX39AATP-dependent RNA helicase DDX39A. (427 aa)
SNRNP70U1 small nuclear ribonucleoprotein 70 kDa isoform X1. (439 aa)
AKAP17AA-kinase anchor protein 17A. (385 aa)
ELLRNA polymerase II elongation factor ELL isoform X1. (626 aa)
DHX36ATP-dependent RNA helicase DHX36. (1015 aa)
SF3A1Splicing factor 3A subunit 1. (793 aa)
Your Current Organism:
Neophocaena asiaeorientalis
NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise
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