(15 nodes) TCP-1-like chaperonin intermediate domain superfamily network (Neophocaena asiaeorientalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MKKS	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin. (570 aa)
	CCT2	T-complex protein 1 subunit beta. (535 aa)
	BBS10	Bardet-Biedl syndrome 10 protein; Belongs to the TCP-1 chaperonin family. (721 aa)
	PIKFYVE	1-phosphatidylinositol 3-phosphate 5-kinase isoform X1. (2110 aa)
	CCT8L2	LOW QUALITY PROTEIN: T-complex protein 1 subunit theta-like 2; Belongs to the TCP-1 chaperonin family. (530 aa)
	BBS12	Bardet-Biedl syndrome 12 protein. (714 aa)
	CCT6A	T-complex protein 1 subunit zeta. (531 aa)
	TCP1	T-complex protein 1 subunit alpha. (556 aa)
	CCT3	T-complex protein 1 subunit gamma. (545 aa)
	CCT8	T-complex protein 1 subunit theta. (548 aa)
	CCT4	T-complex protein 1 subunit delta. (539 aa)
	HSPD1	60 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family. (573 aa)
	CCT7	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. (543 aa)
	CCT5	T-complex protein 1 subunit epsilon. (541 aa)
	CCT6B	T-complex protein 1 subunit zeta-2. (245 aa)

Your Current Organism:

Neophocaena asiaeorientalis

NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BBS10	BBS12	A0A341ASE9	A0A341BDL5	Bardet-Biedl syndrome 10 protein; Belongs to the TCP-1 chaperonin family.	Bardet-Biedl syndrome 12 protein.	0.982
BBS10	CCT2	A0A341ASE9	A0A341AS21	Bardet-Biedl syndrome 10 protein; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit beta.	0.992
BBS10	CCT3	A0A341ASE9	A0A341BQR8	Bardet-Biedl syndrome 10 protein; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit gamma.	0.978
BBS10	CCT4	A0A341ASE9	A0A341C2S1	Bardet-Biedl syndrome 10 protein; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit delta.	0.991
BBS10	CCT5	A0A341ASE9	A0A341D7I3	Bardet-Biedl syndrome 10 protein; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit epsilon.	0.992
BBS10	CCT6A	A0A341ASE9	A0A341BED2	Bardet-Biedl syndrome 10 protein; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit zeta.	0.981
BBS10	CCT6B	A0A341ASE9	A0A341DDF7	Bardet-Biedl syndrome 10 protein; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit zeta-2.	0.981
BBS10	CCT7	A0A341ASE9	A0A341D150	Bardet-Biedl syndrome 10 protein; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.991
BBS10	CCT8	A0A341ASE9	A0A341C1E9	Bardet-Biedl syndrome 10 protein; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit theta.	0.980
BBS10	CCT8L2	A0A341ASE9	A0A341AZI5	Bardet-Biedl syndrome 10 protein; Belongs to the TCP-1 chaperonin family.	LOW QUALITY PROTEIN: T-complex protein 1 subunit theta-like 2; Belongs to the TCP-1 chaperonin family.	0.980
BBS10	HSPD1	A0A341ASE9	A0A341CEN4	Bardet-Biedl syndrome 10 protein; Belongs to the TCP-1 chaperonin family.	60 kDa heat shock protein, mitochondrial; Belongs to the chaperonin (HSP60) family.	0.677
BBS10	MKKS	A0A341ASE9	A0A341APW9	Bardet-Biedl syndrome 10 protein; Belongs to the TCP-1 chaperonin family.	McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin.	0.837
BBS10	TCP1	A0A341ASE9	A0A341BPT8	Bardet-Biedl syndrome 10 protein; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit alpha.	0.758
BBS12	BBS10	A0A341BDL5	A0A341ASE9	Bardet-Biedl syndrome 12 protein.	Bardet-Biedl syndrome 10 protein; Belongs to the TCP-1 chaperonin family.	0.982
BBS12	CCT2	A0A341BDL5	A0A341AS21	Bardet-Biedl syndrome 12 protein.	T-complex protein 1 subunit beta.	0.759
BBS12	CCT3	A0A341BDL5	A0A341BQR8	Bardet-Biedl syndrome 12 protein.	T-complex protein 1 subunit gamma.	0.759
BBS12	CCT4	A0A341BDL5	A0A341C2S1	Bardet-Biedl syndrome 12 protein.	T-complex protein 1 subunit delta.	0.759
BBS12	CCT5	A0A341BDL5	A0A341D7I3	Bardet-Biedl syndrome 12 protein.	T-complex protein 1 subunit epsilon.	0.759
BBS12	CCT6A	A0A341BDL5	A0A341BED2	Bardet-Biedl syndrome 12 protein.	T-complex protein 1 subunit zeta.	0.551
BBS12	CCT6B	A0A341BDL5	A0A341DDF7	Bardet-Biedl syndrome 12 protein.	T-complex protein 1 subunit zeta-2.	0.551