STRINGSTRING
NUP62 NUP62 LUZP4 LUZP4 NUP37 NUP37 NUP98 NUP98 MAGOHB MAGOHB RBM8A RBM8A NCBP1 NCBP1 NUP88 NUP88 U2AF1L4 U2AF1L4 DHX38 DHX38 SRSF11 SRSF11 SARNP SARNP NUP50 NUP50 AAAS AAAS NUP107 NUP107 NUPL2 NUPL2 NUP205 NUP205 POLDIP3 POLDIP3 DDX39B DDX39B NUP62CL NUP62CL MAGOH MAGOH NDC1 NDC1 SRSF5 SRSF5 SEC13 SEC13 SRSF9 SRSF9 CDC40 CDC40 THOC3 THOC3 LOC112397693 LOC112397693 CASC3 CASC3 THOC7 THOC7 POM121 POM121 NXF3 NXF3 THOC2 THOC2 CHTOP CHTOP NUP93 NUP93 NXF1 NXF1 NUP43 NUP43 NUP210L NUP210L NUP160 NUP160 NXT2 NXT2 SLU7 SLU7 NUP58 NUP58 RAE1 RAE1 NXT1 NXT1 UPF3B UPF3B TPR TPR ZC3H11A ZC3H11A NCBP2 NCBP2 SREK1 SREK1 LOC112404600 LOC112404600 SRSF7 SRSF7 NUP54 NUP54 NUP155 NUP155 U2AF2 U2AF2 FYTTD1 FYTTD1 LOC112406796 LOC112406796 SRSF1 SRSF1 THOC1 THOC1 LOC112408377 LOC112408377 U2AF1 U2AF1 LOC112409003 LOC112409003 LOC112409002 LOC112409002 THOC6 THOC6 RNPS1 RNPS1 NUP85 NUP85 ALYREF ALYREF CUNH12orf50 CUNH12orf50 EIF4A3 EIF4A3 NUP214 NUP214 GLE1 GLE1 NUP188 NUP188 LOC112411694 LOC112411694 NUP210 NUP210 CUNH20orf196 CUNH20orf196 SEH1L SEH1L NUP153 NUP153 NUP133 NUP133 SRSF3 SRSF3 NUP35 NUP35 SRRM1 SRRM1 DDX39A DDX39A THOC5 THOC5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NUP62Nuclear pore glycoprotein p62 isoform X1. (516 aa)
LUZP4LOW QUALITY PROTEIN: leucine zipper protein 4. (359 aa)
NUP37Nucleoporin Nup37 isoform X1. (326 aa)
NUP98Nuclear pore complex protein Nup98-Nup96 isoform X1. (1817 aa)
MAGOHBProtein mago nashi homolog 2 isoform X1. (148 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (160 aa)
NCBP1Nuclear cap-binding protein subunit 1. (790 aa)
NUP88Nuclear pore complex protein Nup88. (796 aa)
U2AF1L4Splicing factor U2AF 26 kDa subunit isoform X2. (237 aa)
DHX38pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1227 aa)
SRSF11Serine/arginine-rich splicing factor 11 isoform X1. (489 aa)
SARNPSAP domain-containing ribonucleoprotein. (210 aa)
NUP50Nuclear pore complex protein Nup50 isoform X1. (469 aa)
AAASAladin. (547 aa)
NUP107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (926 aa)
NUPL2Nucleoporin-like protein 2. (420 aa)
NUP205Nuclear pore complex protein Nup205. (2012 aa)
POLDIP3Polymerase delta-interacting protein 3 isoform X1. (421 aa)
DDX39BSpliceosome RNA helicase DDX39B. (507 aa)
NUP62CLNucleoporin-62 C-terminal-like protein. (422 aa)
MAGOHProtein mago nashi homolog. (146 aa)
NDC1Nucleoporin NDC1. (706 aa)
SRSF5Serine/arginine-rich splicing factor 5 isoform X1. (274 aa)
SEC13Protein SEC13 homolog; Belongs to the WD repeat SEC13 family. (305 aa)
SRSF9Serine/arginine-rich splicing factor 9. (221 aa)
CDC40pre-mRNA-processing factor 17 isoform X1. (579 aa)
THOC3THO complex subunit 3. (351 aa)
LOC112397693RNA-binding protein with serine-rich domain 1-like. (358 aa)
CASC3Protein CASC3. (697 aa)
THOC7THO complex subunit 7 homolog. (204 aa)
POM121Nuclear envelope pore membrane protein POM 121. (1215 aa)
NXF3Nuclear RNA export factor 3. (543 aa)
THOC2THO complex subunit 2 isoform X1. (1642 aa)
CHTOPChromatin target of PRMT1 protein isoform X1. (249 aa)
NUP93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (827 aa)
NXF1Nuclear RNA export factor 1. (620 aa)
NUP43Nucleoporin Nup43 isoform X1. (380 aa)
NUP210LNuclear pore membrane glycoprotein 210-like. (1887 aa)
NUP160Nuclear pore complex protein Nup160. (1402 aa)
NXT2NTF2-related export protein 2 isoform X1. (197 aa)
SLU7pre-mRNA-splicing factor SLU7 isoform X1. (603 aa)
NUP58Nucleoporin p58/p45. (553 aa)
RAE1mRNA export factor. (368 aa)
NXT1NTF2-related export protein 1 isoform X1. (222 aa)
UPF3BRegulator of nonsense transcripts 3B isoform X1. (490 aa)
TPRNucleoprotein TPR isoform X1. (2438 aa)
ZC3H11AZinc finger CCCH domain-containing protein 11A isoform X1. (822 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
SREK1Splicing regulatory glutamine/lysine-rich protein 1 isoform X1. (629 aa)
LOC112404600Nuclear RNA export factor 2-like. (423 aa)
SRSF7Serine/arginine-rich splicing factor 7 isoform X1. (238 aa)
NUP54Nucleoporin p54. (509 aa)
NUP155Nuclear pore complex protein Nup155. (1391 aa)
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (452 aa)
FYTTD1UAP56-interacting factor. (317 aa)
LOC112406796Nuclear RNA export factor 2-like. (778 aa)
SRSF1Serine/arginine-rich splicing factor 1 isoform X1. (248 aa)
THOC1THO complex subunit 1. (657 aa)
LOC112408377E3 SUMO-protein ligase RanBP2-like isoform X1. (3098 aa)
U2AF1Splicing factor U2AF 35 kDa subunit. (164 aa)
LOC112409003Nuclear RNA export factor 5-like. (126 aa)
LOC112409002Nuclear RNA export factor 5-like. (225 aa)
THOC6THO complex subunit 6 homolog isoform X1. (341 aa)
RNPS1RNA-binding protein with serine-rich domain 1 isoform X1. (305 aa)
NUP85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (656 aa)
ALYREFTHO complex subunit 4. (187 aa)
CUNH12orf50Uncharacterized protein C12orf50 homolog. (375 aa)
EIF4A3Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (411 aa)
NUP214Nuclear pore complex protein Nup214 isoform X1. (2149 aa)
GLE1Nucleoporin GLE1. (698 aa)
NUP188Nucleoporin NUP188 homolog isoform X1. (1748 aa)
LOC112411694LOW QUALITY PROTEIN: nuclear RNA export factor 2-like. (565 aa)
NUP210Nuclear pore membrane glycoprotein 210. (1836 aa)
CUNH20orf196Uncharacterized protein C20orf196 homolog isoform X1. (225 aa)
SEH1LNucleoporin SEH1 isoform X2; Belongs to the WD repeat SEC13 family. (423 aa)
NUP153Nuclear pore complex protein Nup153 isoform X1. (1478 aa)
NUP133Nuclear pore complex protein Nup133 isoform X1. (1156 aa)
SRSF3Serine/arginine-rich splicing factor 3. (164 aa)
NUP35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (327 aa)
SRRM1Serine/arginine repetitive matrix protein 1 isoform X1. (918 aa)
DDX39AATP-dependent RNA helicase DDX39A. (427 aa)
THOC5THO complex subunit 5 homolog. (681 aa)
Your Current Organism:
Neophocaena asiaeorientalis
NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise
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