STRINGSTRING
MAPK1 MAPK1 FURIN FURIN UBA52 UBA52 KXD1 KXD1 JUNB JUNB WWTR1 WWTR1 TFDP2 TFDP2 SMAD3 SMAD3 LOC112393165 LOC112393165 LOC112394096 LOC112394096 SP1 SP1 CCNT1 CCNT1 PCSK4 PCSK4 CDK19 CDK19 RBL1 RBL1 MAPK3 MAPK3 MEN1 MEN1 TFDP1 TFDP1 RPS27A RPS27A UBB UBB CDK8 CDK8 CCNQ CCNQ SMAD7 SMAD7 SMAD2 SMAD2 SMAD4 SMAD4 CCNK CCNK CCNC CCNC LOC112410685 LOC112410685 CDK9 CDK9 CCNT2 CCNT2 E2F5 E2F5 E2F4 E2F4 LOC112392958 LOC112392958
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MAPK1Mitogen-activated protein kinase. (343 aa)
FURINFurin; Belongs to the peptidase S8 family. (792 aa)
UBA52ubiquitin-60S ribosomal protein L40. (128 aa)
KXD1kxDL motif-containing protein 1. (176 aa)
JUNBTranscription factor jun-B. (347 aa)
WWTR1WW domain-containing transcription regulator protein 1. (400 aa)
TFDP2Transcription factor Dp-2 isoform X1. (470 aa)
SMAD3Mothers against decapentaplegic homolog. (376 aa)
LOC112393165E3 ubiquitin-protein ligase Arkadia-like isoform X1. (216 aa)
LOC112394096Ubiquitin-like. (144 aa)
SP1Transcription factor Sp1. (780 aa)
CCNT1cyclin-T1 isoform X1; Belongs to the cyclin family. (727 aa)
PCSK4Proprotein convertase subtilisin/kexin type 4; Belongs to the peptidase S8 family. (765 aa)
CDK19Cyclin-dependent kinase 19 isoform X1. (502 aa)
RBL1Retinoblastoma-like protein 1 isoform X1. (1073 aa)
MAPK3Mitogen-activated protein kinase 3. (265 aa)
MEN1Menin isoform X1. (616 aa)
TFDP1Transcription factor. (410 aa)
RPS27Aubiquitin-40S ribosomal protein S27a. (156 aa)
UBBpolyubiquitin-B. (153 aa)
CDK8Cyclin-dependent kinase 8 isoform X1. (404 aa)
CCNQcyclin-Q isoform X1. (233 aa)
SMAD7Mothers against decapentaplegic homolog. (426 aa)
SMAD2Mothers against decapentaplegic homolog. (467 aa)
SMAD4Mothers against decapentaplegic homolog. (599 aa)
CCNKcyclin-K; Belongs to the cyclin family. (452 aa)
CCNCcyclin-C isoform X1; Belongs to the cyclin family. (283 aa)
LOC112410685E3 ubiquitin-protein ligase Arkadia isoform X1. (796 aa)
CDK9Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily. (372 aa)
CCNT2cyclin-T2 isoform X1; Belongs to the cyclin family. (742 aa)
E2F5Transcription factor E2F5. (391 aa)
E2F4Transcription factor E2F4 isoform X1. (405 aa)
LOC112392958ubiquitin-40S ribosomal protein S27a-like. (157 aa)
Your Current Organism:
Neophocaena asiaeorientalis
NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise
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