Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ATF2 | ATF7 | A0A341AHM6 | A0A341ARX1 | Cyclic AMP-dependent transcription factor ATF-2 isoform X1. | Cyclic AMP-dependent transcription factor ATF-7 isoform X1. | 0.709 |
| ATF2 | CREB5 | A0A341AHM6 | A0A341C7M6 | Cyclic AMP-dependent transcription factor ATF-2 isoform X1. | Cyclic AMP-responsive element-binding protein 5. | 0.969 |
| ATF2 | ELP3 | A0A341AHM6 | A0A341D9T0 | Cyclic AMP-dependent transcription factor ATF-2 isoform X1. | Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. | 0.711 |
| ATF2 | HAT1 | A0A341AHM6 | A0A341AHI7 | Cyclic AMP-dependent transcription factor ATF-2 isoform X1. | Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. | 0.499 |
| ATF2 | ING3 | A0A341AHM6 | A0A341CI19 | Cyclic AMP-dependent transcription factor ATF-2 isoform X1. | Inhibitor of growth protein. | 0.442 |
| ATF2 | LOC112403296 | A0A341AHM6 | A0A341BUQ9 | Cyclic AMP-dependent transcription factor ATF-2 isoform X1. | Histone H2B; Belongs to the histone H2B family. | 0.566 |
| ATF2 | LOC112412589 | A0A341AHM6 | A0A341CZB5 | Cyclic AMP-dependent transcription factor ATF-2 isoform X1. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.648 |
| ATF2 | WDR5B | A0A341AHM6 | A0A341DDC9 | Cyclic AMP-dependent transcription factor ATF-2 isoform X1. | WD repeat-containing protein 5B isoform X1. | 0.406 |
| ATF7 | ATF2 | A0A341ARX1 | A0A341AHM6 | Cyclic AMP-dependent transcription factor ATF-7 isoform X1. | Cyclic AMP-dependent transcription factor ATF-2 isoform X1. | 0.709 |
| ATF7 | CREB5 | A0A341ARX1 | A0A341C7M6 | Cyclic AMP-dependent transcription factor ATF-7 isoform X1. | Cyclic AMP-responsive element-binding protein 5. | 0.889 |
| ATF7 | LOC112412589 | A0A341ARX1 | A0A341CZB5 | Cyclic AMP-dependent transcription factor ATF-7 isoform X1. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.648 |
| ATF7 | TAF5L | A0A341ARX1 | A0A341D310 | Cyclic AMP-dependent transcription factor ATF-7 isoform X1. | annotation not available | 0.470 |
| ATF7 | WDR5B | A0A341ARX1 | A0A341DDC9 | Cyclic AMP-dependent transcription factor ATF-7 isoform X1. | WD repeat-containing protein 5B isoform X1. | 0.406 |
| ATXN7L3 | ENY2 | A0A341CNI0 | A0A341B110 | Ataxin-7-like protein 3; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for transcription. Required for nuclear receptor-mediated transactivation. Within the complex, it is required to recruit USP22 and EN [...] | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for trans [...] | 0.980 |
| ATXN7L3 | LOC112394913 | A0A341CNI0 | A0A341ASZ2 | Ataxin-7-like protein 3; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for transcription. Required for nuclear receptor-mediated transactivation. Within the complex, it is required to recruit USP22 and EN [...] | Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for trans [...] | 0.980 |
| ATXN7L3 | SAP130 | A0A341CNI0 | A0A341AW32 | Ataxin-7-like protein 3; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for transcription. Required for nuclear receptor-mediated transactivation. Within the complex, it is required to recruit USP22 and EN [...] | Histone deacetylase complex subunit SAP130 isoform X7. | 0.548 |
| ATXN7L3 | SGF29 | A0A341CNI0 | A0A341BE77 | Ataxin-7-like protein 3; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for transcription. Required for nuclear receptor-mediated transactivation. Within the complex, it is required to recruit USP22 and EN [...] | SAGA-associated factor 29. | 0.947 |
| ATXN7L3 | SUPT20H | A0A341CNI0 | A0A341C8J4 | Ataxin-7-like protein 3; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for transcription. Required for nuclear receptor-mediated transactivation. Within the complex, it is required to recruit USP22 and EN [...] | Transcription factor SPT20 homolog isoform X1. | 0.977 |
| ATXN7L3 | SUPT3H | A0A341CNI0 | A0A341D6K9 | Ataxin-7-like protein 3; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for transcription. Required for nuclear receptor-mediated transactivation. Within the complex, it is required to recruit USP22 and EN [...] | Transcription initiation protein SPT3 homolog. | 0.968 |
| ATXN7L3 | SUPT7L | A0A341CNI0 | A0A341CZX4 | Ataxin-7-like protein 3; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates both histones H2A and H2B. The SAGA complex is recruited to specific gene promoters by activators such as MYC, where it is required for transcription. Required for nuclear receptor-mediated transactivation. Within the complex, it is required to recruit USP22 and EN [...] | STAGA complex 65 subunit gamma. | 0.958 |
page 1 of 76