STRINGSTRING
YBX2 YBX2 RBM17 RBM17 SNRPN SNRPN CWC15 CWC15 DHX9 DHX9 RALYL RALYL ZNF830 ZNF830 HNRNPA3 HNRNPA3 NOL8 NOL8 YBX3 YBX3 LOC112390679 LOC112390679 PLRG1 PLRG1 RBM22 RBM22 MAGOHB MAGOHB RBM8A RBM8A SYNCRIP SYNCRIP MFAP1 MFAP1 PARPBP PARPBP AQR AQR WBP11 WBP11 NCBP1 NCBP1 RBM42 RBM42 U2AF1L4 U2AF1L4 POLR2I POLR2I DHX38 DHX38 SRSF11 SRSF11 GPATCH1 GPATCH1 PRPF40A PRPF40A LOC112392666 LOC112392666 SF3B3 SF3B3 PRPF8 PRPF8 LOC112393288 LOC112393288 PCBP2 PCBP2 RBM5 RBM5 LSM6 LSM6 HNRNPA1 HNRNPA1 CSDC2 CSDC2 LOC112394370 LOC112394370 SNW1 SNW1 DDX23 DDX23 SNU13 SNU13 NSRP1 NSRP1 PHF5A PHF5A PRPF4B PRPF4B TRA2A TRA2A LSM5 LSM5 DHX33 DHX33 DHX16 DHX16 RBM6 RBM6 RBM25 RBM25 LOC112395555 LOC112395555 RIMS3 RIMS3 POLR2D POLR2D SLIRP SLIRP MAGOH MAGOH PRPF38A PRPF38A SF3A3 SF3A3 PRR3 PRR3 LSM2 LSM2 PRPF18 PRPF18 LOC112395505 LOC112395505 CACTIN CACTIN SNIP1 SNIP1 PTBP1 PTBP1 CIRBP CIRBP LRMDA LRMDA DAW1 DAW1 RBMX2 RBMX2 SF3A2 SF3A2 POLR2E POLR2E HSPA8 HSPA8 SRSF5 SRSF5 LOC112396941 LOC112396941 LSM7 LSM7 SRSF9 SRSF9 ACIN1 ACIN1 CDC40 CDC40 LOC112397904 LOC112397904 PUF60 PUF60 LOC112398094 LOC112398094 LUC7L3 LUC7L3 TFIP11 TFIP11 LENG1 LENG1 LOC112397519 LOC112397519 CWC25 CWC25 LOC112397693 LOC112397693 CTNNBL1 CTNNBL1 LOC112398678 LOC112398678 LOC112397899 LOC112397899 LOC112398861 LOC112398861 SNRPA1 SNRPA1 RALY RALY DHX35 DHX35 SNRPB SNRPB FUS FUS USP39 USP39 PPIH PPIH SNRNP200 SNRNP200 CASC3 CASC3 UPK3BL1 UPK3BL1 POLR2J POLR2J SRRM3 SRRM3 UBL5 UBL5 YJU2 YJU2 YBX1 YBX1 PRKRIP1 PRKRIP1 XAB2 XAB2 BUD31 BUD31 HNRNPAB HNRNPAB FAM50A FAM50A SRRT SRRT HNRNPH2 HNRNPH2 DHX15 DHX15 DDX41 DDX41 HNRNPM HNRNPM SRSF6 SRSF6 TMIGD2 TMIGD2 GTF2F1 GTF2F1 SRSF12 SRSF12 PCBP4 PCBP4 POLR2C POLR2C POLR2B POLR2B LOC112401079 LOC112401079 SF3B5 SF3B5 LOC112401310 LOC112401310 PPIL4 PPIL4 POLR2A POLR2A POLR2G POLR2G PRPF19 PRPF19 LOC112402036 LOC112402036 PRCC PRCC SF3B2 SF3B2 SART1 SART1 POLR2L POLR2L HNRNPUL2 HNRNPUL2 SF1 SF1 RBM10 RBM10 SLU7 SLU7 PTBP2 PTBP2 PRPF6 PRPF6 LOC112403690 LOC112403690 CCDC12 CCDC12 SNRPE SNRPE LOC112404035 LOC112404035 UPF3B UPF3B RBM7 RBM7 RNF113A RNF113A HNRNPA0 HNRNPA0 CUNHXorf56 CUNHXorf56 NCBP2 NCBP2 WDR53 WDR53 DHX32 DHX32 BUD13 BUD13 TCERG1 TCERG1 DDX46 DDX46 ZMAT2 ZMAT2 PPWD1 PPWD1 SNRPB2 SNRPB2 IK IK SREK1 SREK1 CWC27 CWC27 HNRNPLL HNRNPLL HNRNPK HNRNPK SAP18 SAP18 SRSF7 SRSF7 SDE2 SDE2 CRNKL1 CRNKL1 SNRPF SNRPF SMU1 SMU1 WDR70 WDR70 HNRNPU HNRNPU TXNL4A TXNL4A NKTR NKTR HNRNPA2B1 HNRNPA2B1 LOC112405657 LOC112405657 LOC112405969 LOC112405969 U2AF2 U2AF2 GTF2F2 GTF2F2 SMNDC1 SMNDC1 LOC112407027 LOC112407027 SNRPG SNRPG SNRNP27 SNRNP27 LOC112407344 LOC112407344 POLR2K POLR2K RBMXL2 RBMXL2 PCBP1 PCBP1 PTBP3 PTBP3 PPIL3 PPIL3 SF3B1 SF3B1 LOC112408071 LOC112408071 SRSF1 SRSF1 SNRPD1 SNRPD1 LSM8 LSM8 PAXBP1 PAXBP1 PCBP3 PCBP3 U2AF1 U2AF1 GCFC2 GCFC2 HNRNPD HNRNPD LOC112409390 LOC112409390 CARHSP1 CARHSP1 SRRM2 SRRM2 HTATSF1 HTATSF1 RBMX RBMX LOC112409354 LOC112409354 RNPS1 RNPS1 TPRG1L TPRG1L WDR25 WDR25 SRSF2 SRSF2 LOC112410027 LOC112410027 DHX8 DHX8 HNRNPC HNRNPC ALYREF ALYREF DDX42 DDX42 POLR2F POLR2F EFTUD2 EFTUD2 DDX5 DDX5 PNN PNN EIF4A3 EIF4A3 CUNH9orf78 CUNH9orf78 PPIG PPIG PRPF4 PRPF4 LOC112411956 LOC112411956 LSM3 LSM3 SNRPD3 SNRPD3 NKAPL NKAPL PPIL2 PPIL2 SF3B6 SF3B6 LOC112413037 LOC112413037 LOC112412854 LOC112412854 HNRNPH1 HNRNPH1 HNRNPF HNRNPF MTREX MTREX WBP4 WBP4 HNRNPH3 HNRNPH3 BCAS2 BCAS2 PRPF3 PRPF3 SF3B4 SF3B4 DQX1 DQX1 CDC5L CDC5L PPIL1 PPIL1 SNRPC SNRPC SRSF3 SRSF3 CCAR1 CCAR1 SRSF10 SRSF10 CWC22 CWC22 HNRNPR HNRNPR LOC112414307 LOC112414307 DNAJC8 DNAJC8 SNRNP40 SNRNP40 SRSF4 SRSF4 SRRM1 SRRM1 SYF2 SYF2 PPP1R8 PPP1R8 POLR2H POLR2H SUGP2 SUGP2 TPRG1 TPRG1 SUGP1 SUGP1 CHERP CHERP TRA2B TRA2B LSM4 LSM4 SNRNP70 SNRNP70 HNRNPUL1 HNRNPUL1 SNRPA SNRPA HNRNPL HNRNPL LOC112415293 LOC112415293 DHX34 DHX34 FAM32A FAM32A SNRPD2 SNRPD2 SPACA6 SPACA6 SF3A1 SF3A1 CWF19L2 CWF19L2 U2SURP U2SURP RBM3 RBM3 PQBP1 PQBP1 GPKOW GPKOW
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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YBX2Y-box-binding protein 2. (410 aa)
RBM17Splicing factor 45. (401 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (240 aa)
CWC15Spliceosome-associated protein CWC15 homolog. (231 aa)
DHX9ATP-dependent RNA helicase A isoform X1. (1253 aa)
RALYLRNA-binding Raly-like protein. (292 aa)
ZNF830Zinc finger protein 830. (380 aa)
HNRNPA3Heterogeneous nuclear ribonucleoprotein A3 isoform X1. (377 aa)
NOL8Nucleolar protein 8. (1169 aa)
YBX3Y-box-binding protein 3. (348 aa)
LOC112390679NF-kappa-B-activating protein. (413 aa)
PLRG1Pleiotropic regulator 1 isoform X1. (513 aa)
RBM22pre-mRNA-splicing factor RBM22 isoform X1. (420 aa)
MAGOHBProtein mago nashi homolog 2 isoform X1. (148 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (160 aa)
SYNCRIPHeterogeneous nuclear ribonucleoprotein Q isoform X1. (623 aa)
MFAP1Microfibrillar-associated protein 1. (439 aa)
PARPBPPCNA-interacting partner. (580 aa)
AQRRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1485 aa)
WBP11WW domain-binding protein 11. (641 aa)
NCBP1Nuclear cap-binding protein subunit 1. (790 aa)
RBM42RNA-binding protein 42 isoform X1. (477 aa)
U2AF1L4Splicing factor U2AF 26 kDa subunit isoform X2. (237 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
DHX38pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1227 aa)
SRSF11Serine/arginine-rich splicing factor 11 isoform X1. (489 aa)
GPATCH1G patch domain-containing protein 1. (931 aa)
PRPF40Apre-mRNA-processing factor 40 homolog A isoform X4. (997 aa)
LOC112392666G-patch domain and KOW motifs-containing protein-like. (486 aa)
SF3B3Splicing factor 3B subunit 3. (1217 aa)
PRPF8pre-mRNA-processing-splicing factor 8. (2335 aa)
LOC112393288LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like. (391 aa)
PCBP2poly(RC)-binding protein 2 isoform X1. (366 aa)
RBM5RNA-binding protein 5 isoform X1. (855 aa)
LSM6U6 snRNA-associated Sm-like protein LSm6. (80 aa)
HNRNPA1Heterogeneous nuclear ribonucleoprotein A1. (370 aa)
CSDC2Cold shock domain-containing protein C2. (153 aa)
LOC112394370Protein FAM50A. (330 aa)
SNW1SNW domain-containing protein 1. (536 aa)
DDX23Probable ATP-dependent RNA helicase DDX23. (818 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
NSRP1Nuclear speckle splicing regulatory protein 1. (559 aa)
PHF5APHD finger-like domain-containing protein 5A. (110 aa)
PRPF4BSerine/threonine-protein kinase PRP4 homolog. (1041 aa)
TRA2ATransformer-2 protein homolog alpha isoform X1. (288 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
DHX33Putative ATP-dependent RNA helicase DHX33. (707 aa)
DHX16pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. (1045 aa)
RBM6RNA-binding protein 6 isoform X1. (1122 aa)
RBM25RNA-binding protein 25. (843 aa)
LOC112395555Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
RIMS3Regulating synaptic membrane exocytosis protein 3 isoform X1. (444 aa)
POLR2DDNA-directed RNA polymerase II subunit RPB4 isoform X1. (142 aa)
SLIRPSRA stem-loop-interacting RNA-binding protein, mitochondrial isoform X1. (111 aa)
MAGOHProtein mago nashi homolog. (146 aa)
PRPF38Apre-mRNA-splicing factor 38A. (312 aa)
SF3A3Splicing factor 3A subunit 3. (501 aa)
PRR3Proline-rich protein 3 isoform X1. (226 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
PRPF18pre-mRNA-splicing factor 18 isoform X1. (351 aa)
LOC112395505Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (320 aa)
CACTINCactin. (754 aa)
SNIP1Smad nuclear-interacting protein 1. (394 aa)
PTBP1Polypyrimidine tract-binding protein 1 isoform X1. (557 aa)
CIRBPCold-inducible RNA-binding protein. (172 aa)
LRMDALeucine-rich melanocyte differentiation-associated protein isoform X1. (226 aa)
DAW1Dynein assembly factor with WDR repeat domains 1. (429 aa)
RBMX2RNA-binding motif protein, X-linked 2. (327 aa)
SF3A2Splicing factor 3A subunit 2. (443 aa)
POLR2EDNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
HSPA8Heat shock cognate 71 kDa protein; Belongs to the heat shock protein 70 family. (650 aa)
SRSF5Serine/arginine-rich splicing factor 5 isoform X1. (274 aa)
LOC112396941LOW QUALITY PROTEIN: WW domain-binding protein 4-like. (283 aa)
LSM7LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein LSm7. (103 aa)
SRSF9Serine/arginine-rich splicing factor 9. (221 aa)
ACIN1Apoptotic chromatin condensation inducer in the nucleus isoform X1. (1337 aa)
CDC40pre-mRNA-processing factor 17 isoform X1. (579 aa)
LOC112397904U4/U6 small nuclear ribonucleoprotein Prp31. (499 aa)
PUF60LOW QUALITY PROTEIN: poly(U)-binding-splicing factor PUF60. (560 aa)
LOC112398094LOW QUALITY PROTEIN: putative RNA-binding protein Luc7-like 2. (392 aa)
LUC7L3LOW QUALITY PROTEIN: luc7-like protein 3. (491 aa)
TFIP11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Intron turnover seems to proceed through reactions in two lariat-intron associated complexes termed Intron Large (IL) and Intron Small (IS). In cooperation with DHX15 seems to mediate the transition of the U2, U5 and U6 snRNP- containing IL complex to the snRNP-free IS complex leading to efficient debranching and turnover of excised introns. May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extrac [...] (838 aa)
LENG1Leukocyte receptor cluster member 1. (263 aa)
LOC112397519RNA binding motif protein, X-linked-like-1. (498 aa)
CWC25pre-mRNA-splicing factor CWC25 homolog isoform X1. (460 aa)
LOC112397693RNA-binding protein with serine-rich domain 1-like. (358 aa)
CTNNBL1Beta-catenin-like protein 1. (563 aa)
LOC112398678LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A1-like. (320 aa)
LOC112397899U4/U6 small nuclear ribonucleoprotein Prp31-like. (151 aa)
LOC112398861Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (79 aa)
SNRPA1U2 small nuclear ribonucleoprotein A. (255 aa)
RALYRNA-binding protein Raly isoform X1. (312 aa)
DHX35Probable ATP-dependent RNA helicase DHX35 isoform X1. (719 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
FUSRNA-binding protein FUS isoform X1. (514 aa)
USP39U4/U6.U5 tri-snRNP-associated protein 2 isoform X1. (565 aa)
PPIHPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
SNRNP200U5 small nuclear ribonucleoprotein 200 kDa helicase. (2136 aa)
CASC3Protein CASC3. (697 aa)
UPK3BL1LOW QUALITY PROTEIN: uroplakin-3b-like protein 1. (253 aa)
POLR2JDNA-directed RNA polymerase II subunit RPB11-a. (117 aa)
SRRM3LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 3. (452 aa)
UBL5Ubiquitin-like protein 5. (73 aa)
YJU2Coiled-coil domain-containing protein 94 isoform X1. (343 aa)
YBX1LOW QUALITY PROTEIN: nuclease-sensitive element-binding protein 1. (493 aa)
PRKRIP1PRKR-interacting protein 1. (184 aa)
XAB2LOW QUALITY PROTEIN: pre-mRNA-splicing factor SYF1. (882 aa)
BUD31Protein BUD31 homolog isoform X1. (149 aa)
HNRNPABHeterogeneous nuclear ribonucleoprotein A/B isoform X1. (335 aa)
FAM50AProtein FAM50A isoform X1. (309 aa)
SRRTSerrate RNA effector molecule homolog. (873 aa)
HNRNPH2Heterogeneous nuclear ribonucleoprotein H2. (449 aa)
DHX15pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. (795 aa)
DDX41Probable ATP-dependent RNA helicase DDX41 isoform X1. (622 aa)
HNRNPMHeterogeneous nuclear ribonucleoprotein M isoform X1. (730 aa)
SRSF6Serine/arginine-rich splicing factor 6. (345 aa)
TMIGD2Transmembrane and immunoglobulin domain-containing protein 2. (231 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (517 aa)
SRSF12Serine/arginine-rich splicing factor 12. (166 aa)
PCBP4poly(RC)-binding protein 4 isoform X1. (404 aa)
POLR2CDNA-directed RNA polymerase II subunit RPB3. (275 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
LOC112401079LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein K-like. (463 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
LOC112401310Heterogeneous nuclear ribonucleoprotein A1-like. (258 aa)
PPIL4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (492 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1970 aa)
POLR2GDNA-directed RNA polymerase II subunit RPB7. (172 aa)
PRPF19pre-mRNA-processing factor 19. (521 aa)
LOC112402036LOW QUALITY PROTEIN: RING finger protein 113A-like. (400 aa)
PRCCProline-rich protein PRCC isoform X1. (492 aa)
SF3B2Splicing factor 3B subunit 2 isoform X1. (896 aa)
SART1U4/U6.U5 tri-snRNP-associated protein 1. (830 aa)
POLR2LDNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
HNRNPUL2Heterogeneous nuclear ribonucleoprotein U-like protein 2. (748 aa)
SF1Splicing factor 1 isoform X1. (613 aa)
RBM10RNA-binding protein 10 isoform X1. (854 aa)
SLU7pre-mRNA-splicing factor SLU7 isoform X1. (603 aa)
PTBP2Polypyrimidine tract-binding protein 2 isoform X1. (537 aa)
PRPF6pre-mRNA-processing factor 6. (941 aa)
LOC112403690RNA-binding motif protein, X chromosome-like. (115 aa)
CCDC12Coiled-coil domain-containing protein 12 isoform X1. (259 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
LOC112404035NF-kappa-B-activating protein-like. (379 aa)
UPF3BRegulator of nonsense transcripts 3B isoform X1. (490 aa)
RBM7RNA-binding protein 7. (266 aa)
RNF113ARING finger protein 113A. (343 aa)
HNRNPA0Heterogeneous nuclear ribonucleoprotein A0. (302 aa)
CUNHXorf56UPF0428 protein CXorf56 homolog. (222 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
WDR53WD repeat-containing protein 53. (358 aa)
DHX32Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 isoform X1. (746 aa)
BUD13BUD13 homolog. (690 aa)
TCERG1Transcription elongation regulator 1 isoform X1. (1140 aa)
DDX46Probable ATP-dependent RNA helicase DDX46 isoform X1. (1032 aa)
ZMAT2LOW QUALITY PROTEIN: zinc finger matrin-type protein 2. (199 aa)
PPWD1Peptidylprolyl isomerase domain and WD repeat-containing protein 1 isoform X1. (644 aa)
SNRPB2U2 small nuclear ribonucleoprotein B'. (225 aa)
IKProtein Red. (553 aa)
SREK1Splicing regulatory glutamine/lysine-rich protein 1 isoform X1. (629 aa)
CWC27Peptidyl-prolyl cis-trans isomerase CWC27 homolog. (473 aa)
HNRNPLLHeterogeneous nuclear ribonucleoprotein L-like isoform X1. (544 aa)
HNRNPKHeterogeneous nuclear ribonucleoprotein K isoform X1. (464 aa)
SAP18Histone deacetylase complex subunit SAP18. (172 aa)
SRSF7Serine/arginine-rich splicing factor 7 isoform X1. (238 aa)
SDE2Replication stress response regulator SDE2 isoform X1. (453 aa)
CRNKL1Crooked neck-like protein 1. (693 aa)
SNRPFSmall nuclear ribonucleoprotein F isoform X1. (86 aa)
SMU1WD40 repeat-containing protein SMU1 isoform X1. (513 aa)
WDR70WD repeat-containing protein 70. (654 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U isoform X1. (825 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (166 aa)
NKTRNK-tumor recognition protein isoform X1. (1477 aa)
HNRNPA2B1Heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1. (353 aa)
LOC112405657LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein K-like. (462 aa)
LOC112405969Peptidyl-prolyl cis-trans isomerase G. (568 aa)
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (452 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
SMNDC1Survival of motor neuron-related-splicing factor 30. (238 aa)
LOC112407027LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein U-like protein 2. (530 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
SNRNP27U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein. (155 aa)
LOC112407344Heat shock cognate 71 kDa protein-like. (299 aa)
POLR2KDNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
RBMXL2LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked-like-2. (272 aa)
PCBP1poly(RC)-binding protein 1. (356 aa)
PTBP3Polypyrimidine tract-binding protein 3 isoform X1. (555 aa)
PPIL3Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (161 aa)
SF3B1Splicing factor 3B subunit 1 isoform X1. (1377 aa)
LOC112408071Heterogeneous nuclear ribonucleoproteins A2/B1-like isoform X1. (341 aa)
SRSF1Serine/arginine-rich splicing factor 1 isoform X1. (248 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
PAXBP1PAX3- and PAX7-binding protein 1. (917 aa)
PCBP3poly(RC)-binding protein 3 isoform X1. (423 aa)
U2AF1Splicing factor U2AF 35 kDa subunit. (164 aa)
GCFC2GC-rich sequence DNA-binding factor 2 isoform X5. (819 aa)
HNRNPDHeterogeneous nuclear ribonucleoprotein D0 isoform X1. (355 aa)
LOC112409390Putative RNA-binding protein Luc7-like 1. (285 aa)
CARHSP1Calcium-regulated heat-stable protein 1. (147 aa)
SRRM2Serine/arginine repetitive matrix protein 2 isoform X1. (2743 aa)
HTATSF1HIV Tat-specific factor 1. (761 aa)
RBMXRNA-binding motif protein, X chromosome. (391 aa)
LOC112409354Putative RNA-binding protein Luc7-like 1 isoform X1. (371 aa)
RNPS1RNA-binding protein with serine-rich domain 1 isoform X1. (305 aa)
TPRG1LTumor protein p63-regulated gene 1-like protein. (193 aa)
WDR25WD repeat-containing protein 25. (539 aa)
SRSF2Serine/arginine-rich splicing factor 2. (221 aa)
LOC112410027Heterogeneous nuclear ribonucleoprotein A1-like. (229 aa)
DHX8ATP-dependent RNA helicase DHX8. (1214 aa)
HNRNPCHeterogeneous nuclear ribonucleoproteins C1/C2 isoform X1. (306 aa)
ALYREFTHO complex subunit 4. (187 aa)
DDX42ATP-dependent RNA helicase DDX42. (940 aa)
POLR2FDNA-directed RNA polymerases I, II, and III subunit RPABC2 isoform X1. (143 aa)
EFTUD2116 kDa U5 small nuclear ribonucleoprotein component. (972 aa)
DDX5Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (614 aa)
PNNPinin. (757 aa)
EIF4A3Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (411 aa)
CUNH9orf78Telomere length and silencing protein 1 homolog. (289 aa)
PPIGPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (185 aa)
PRPF4U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1. (523 aa)
LOC112411956pre-mRNA-splicing factor ISY1 homolog. (283 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
NKAPLLOW QUALITY PROTEIN: NKAP-like protein. (403 aa)
PPIL2Peptidyl-prolyl cis-trans isomerase-like 2 isoform X1. (522 aa)
SF3B6Splicing factor 3B subunit 6. (125 aa)
LOC112413037LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein H-like. (467 aa)
LOC112412854Heterogeneous nuclear ribonucleoprotein A1-like. (317 aa)
HNRNPH1Heterogeneous nuclear ribonucleoprotein H isoform X1. (492 aa)
HNRNPFHeterogeneous nuclear ribonucleoprotein F. (416 aa)
MTREXExosome RNA helicase MTR4. (1040 aa)
WBP4WW domain-binding protein 4 isoform X1. (377 aa)
HNRNPH3Heterogeneous nuclear ribonucleoprotein H3 isoform X1. (346 aa)
BCAS2pre-mRNA-splicing factor SPF27. (225 aa)
PRPF3U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1. (683 aa)
SF3B4Splicing factor 3B subunit 4. (424 aa)
DQX1ATP-dependent RNA helicase DQX1 isoform X1. (719 aa)
CDC5LCell division cycle 5-like protein. (802 aa)
PPIL1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (159 aa)
SRSF3Serine/arginine-rich splicing factor 3. (164 aa)
CCAR1Cell division cycle and apoptosis regulator protein 1. (1150 aa)
SRSF10Serine/arginine-rich splicing factor 10 isoform X1. (262 aa)
CWC22pre-mRNA-splicing factor CWC22 homolog isoform X1. (901 aa)
HNRNPRHeterogeneous nuclear ribonucleoprotein R isoform X1. (636 aa)
LOC112414307LOW QUALITY PROTEIN: pre-mRNA-splicing factor SYF2-like. (246 aa)
DNAJC8dnaJ homolog subfamily C member 8. (253 aa)
SNRNP40U5 small nuclear ribonucleoprotein 40 kDa protein. (358 aa)
SRSF4Serine/arginine-rich splicing factor 4. (485 aa)
SRRM1Serine/arginine repetitive matrix protein 1 isoform X1. (918 aa)
SYF2pre-mRNA-splicing factor SYF2. (245 aa)
PPP1R8Nuclear inhibitor of protein phosphatase 1. (378 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
SUGP2SURP and G-patch domain-containing protein 2 isoform X1. (1109 aa)
TPRG1LOW QUALITY PROTEIN: tumor protein p63-regulated gene 1 protein. (285 aa)
SUGP1SURP and G-patch domain-containing protein 1 isoform X1. (635 aa)
CHERPCalcium homeostasis endoplasmic reticulum protein. (915 aa)
TRA2BTransformer-2 protein homolog beta isoform X1. (288 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (139 aa)
SNRNP70U1 small nuclear ribonucleoprotein 70 kDa isoform X1. (439 aa)
HNRNPUL1Heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1. (858 aa)
SNRPAU1 small nuclear ribonucleoprotein A. (282 aa)
HNRNPLLOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein L. (590 aa)
LOC112415293Heterogeneous nuclear ribonucleoprotein A1-like. (353 aa)
DHX34Probable ATP-dependent RNA helicase DHX34. (1145 aa)
FAM32AProtein FAM32A. (112 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
SPACA6Sperm acrosome membrane-associated protein 6. (324 aa)
SF3A1Splicing factor 3A subunit 1. (793 aa)
CWF19L2CWF19-like protein 2. (892 aa)
U2SURPU2 snRNP-associated SURP motif-containing protein isoform X2. (1029 aa)
RBM3RNA-binding protein 3 isoform X1. (156 aa)
PQBP1Polyglutamine-binding protein 1. (265 aa)
GPKOWG-patch domain and KOW motifs-containing protein. (476 aa)
Your Current Organism:
Neophocaena asiaeorientalis
NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise
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