STRINGSTRING
LOC112402732 LOC112402732 RPS19 RPS19 EIF4A2 EIF4A2 RPS16 RPS16 RPS11 RPS11 EIF4G1 EIF4G1 RPS18 RPS18 EIF3I EIF3I RPS17 RPS17 LOC112414190 LOC112414190 RPS10 RPS10 EIF4EBP1 EIF4EBP1 EIF4EBP2 EIF4EBP2 LOC112413182 LOC112413182 RPS3A RPS3A LOC112412231 LOC112412231 MICALL2 MICALL2 EIF3B EIF3B RPS8 RPS8 LOC112411003 LOC112411003 EIF3L EIF3L RPS3 RPS3 LOC112411041 LOC112411041 EIF3D EIF3D LOC112410000 LOC112410000 RPS2 RPS2 LOC112409552 LOC112409552 LOC112409079 LOC112409079 LOC112407431 LOC112407431 EIF3F EIF3F LOC112407141 LOC112407141 RPS7 RPS7 PABPC1 PABPC1 LOC112407284 LOC112407284 LOC112407255 LOC112407255 LOC112407142 LOC112407142 EIF3E EIF3E EIF3A EIF3A LOC112406386 LOC112406386 LOC112406387 LOC112406387 LOC112406614 LOC112406614 LOC112406517 LOC112406517 RPSA RPSA RPS27A RPS27A EIF3M EIF3M RPS25 RPS25 RPS21 RPS21 EIF3J EIF3J EIF4A1 EIF4A1 RPS27 RPS27 LOC112402289 LOC112402289 LOC112401634 LOC112401634 LOC112401132 LOC112401132 RPS6 RPS6 LOC112400917 LOC112400917 EIF4H EIF4H PABPC1L PABPC1L EIF2S1 EIF2S1 LOC112400763 LOC112400763 LOC112401126 LOC112401126 LOC112401015 LOC112401015 EIF3G EIF3G RPS28 RPS28 LOC112399255 LOC112399255 PABPC4L PABPC4L RPS4X RPS4X ARL6IP1 ARL6IP1 LOC112398760 LOC112398760 LOC112398745 LOC112398745 LOC112399370 LOC112399370 RPS15A RPS15A EIF2S2 EIF2S2 EIF4E1B EIF4E1B EIF3H EIF3H RPS9 RPS9 LOC112397677 LOC112397677 RPS15 RPS15 RPS5 RPS5 RPS24 RPS24 LOC112395774 LOC112395774 PABPC4 PABPC4 EIF1AX EIF1AX LOC112395716 LOC112395716 LOC112395091 LOC112395091 RPS20 RPS20 RPS26 RPS26 LOC112394209 LOC112394209 LOC112393607 LOC112393607 EIF4E EIF4E EIF4B EIF4B LOC112394096 LOC112394096 RPS23 RPS23 RPS27L RPS27L LOC112392958 LOC112392958 EIF3K EIF3K RPS29 RPS29 RPS14 RPS14 RPS13 RPS13
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC11240273240S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (256 aa)
RPS1940S ribosomal protein S19. (145 aa)
EIF4A2Eukaryotic initiation factor 4A-II isoform X1; Belongs to the DEAD box helicase family. (408 aa)
RPS1640S ribosomal protein S16 isoform X1. (154 aa)
RPS1140S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (158 aa)
EIF4G1Eukaryotic translation initiation factor 4 gamma 1 isoform X1. (1601 aa)
RPS1840S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (152 aa)
EIF3IEukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (325 aa)
RPS1740S ribosomal protein S17. (135 aa)
LOC11241419040S ribosomal protein S27-like. (51 aa)
RPS1040S ribosomal protein S10. (165 aa)
EIF4EBP1Eukaryotic translation initiation factor 4E-binding protein 1. (118 aa)
EIF4EBP2Eukaryotic translation initiation factor 4E-binding protein 2. (120 aa)
LOC112413182LOW QUALITY PROTEIN: 40S ribosomal protein S4-like. (267 aa)
RPS3A40S ribosomal protein S3a; May play a role during erythropoiesis through regulation of transcription factor DDIT3. (264 aa)
LOC11241223140S ribosomal protein S27-like. (83 aa)
MICALL2MICAL-like protein 2 isoform X1. (948 aa)
EIF3BEukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (786 aa)
RPS840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (208 aa)
LOC112411003Eukaryotic translation initiation factor 2 subunit 3. (472 aa)
EIF3LEukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (564 aa)
RPS340S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (243 aa)
LOC112411041LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4B-like. (580 aa)
EIF3DEukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, a complex required for several steps in the initiation of protein synthesis of a specialized repertoire of mRNAs. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl- tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required [...] (548 aa)
LOC11241000040S ribosomal protein S27-like. (80 aa)
RPS240S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (296 aa)
LOC11240955240S ribosomal protein S19-like. (145 aa)
LOC11240907940S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (132 aa)
LOC11240743140S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
EIF3FEukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (363 aa)
LOC112407141Eukaryotic translation initiation factor 1A, X-chromosomal-like; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (147 aa)
RPS740S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (194 aa)
PABPC1Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (636 aa)
LOC11240728440S ribosomal protein S27-like isoform X1. (91 aa)
LOC11240725540S ribosomal protein S27-like. (75 aa)
LOC112407142Eukaryotic translation initiation factor 2 subunit 3-like isoform X1. (472 aa)
EIF3EEukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (445 aa)
EIF3AEukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...] (1358 aa)
LOC112406386LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit J-like. (279 aa)
LOC112406387LOW QUALITY PROTEIN: eukaryotic translation initiation factor 3 subunit J-like. (217 aa)
LOC112406614LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4E-like; Belongs to the eukaryotic initiation factor 4E family. (217 aa)
LOC11240651740S ribosomal protein S3a; May play a role during erythropoiesis through regulation of transcription factor DDIT3. (457 aa)
RPSA40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Also acts as a receptor for several other ligands, including the pathogenic prion protein, viruses, and bacteri [...] (295 aa)
RPS27Aubiquitin-40S ribosomal protein S27a. (156 aa)
EIF3MEukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (374 aa)
RPS2540S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (125 aa)
RPS2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (81 aa)
EIF3JEukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (269 aa)
EIF4A1Eukaryotic initiation factor 4A-I isoform X1; Belongs to the DEAD box helicase family. (406 aa)
RPS2740S ribosomal protein S27. (84 aa)
LOC11240228940S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (267 aa)
LOC11240163440S ribosomal protein S5-like isoform X1. (239 aa)
LOC11240113240S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (157 aa)
RPS640S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (249 aa)
LOC112400917LOW QUALITY PROTEIN: 40S ribosomal protein SA-like; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits; Belongs to the universal ribosomal protein uS2 family. (364 aa)
EIF4HEukaryotic translation initiation factor 4H. (318 aa)
PABPC1LPolyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (612 aa)
EIF2S1Eukaryotic translation initiation factor 2 subunit 1. (315 aa)
LOC112400763LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like. (370 aa)
LOC11240112640S ribosomal protein S27-like. (84 aa)
LOC11240101540S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
EIF3GEukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...] (355 aa)
RPS2840S ribosomal protein S28. (69 aa)
LOC11239925540S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (156 aa)
PABPC4LLOW QUALITY PROTEIN: polyadenylate-binding protein 4-like. (412 aa)
RPS4X40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (260 aa)
ARL6IP1ADP-ribosylation factor-like protein 6-interacting protein 1. (203 aa)
LOC11239876040S ribosomal protein S27. (86 aa)
LOC11239874540S ribosomal protein S27-like. (83 aa)
LOC112399370Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (913 aa)
RPS15A40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family. (130 aa)
EIF2S2Eukaryotic translation initiation factor 2 subunit 2. (333 aa)
EIF4E1BEukaryotic translation initiation factor 4E type 1B; Belongs to the eukaryotic initiation factor 4E family. (253 aa)
EIF3HEukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (352 aa)
RPS940S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (194 aa)
LOC11239767740S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
RPS1540S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
RPS540S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (204 aa)
RPS2440S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (143 aa)
LOC11239577440S ribosomal protein S27. (83 aa)
PABPC4Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. (660 aa)
EIF1AXEukaryotic translation initiation factor 1A, X-chromosomal; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (144 aa)
LOC11239571640S ribosomal protein S27-like. (83 aa)
LOC11239509140S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
RPS2040S ribosomal protein S20. (119 aa)
RPS2640S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
LOC11239420940S ribosomal protein S27. (81 aa)
LOC11239360740S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (261 aa)
EIF4EEukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (303 aa)
EIF4BEukaryotic translation initiation factor 4B isoform X1. (614 aa)
LOC112394096Ubiquitin-like. (144 aa)
RPS2340S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (143 aa)
RPS27L40S ribosomal protein S27. (160 aa)
LOC112392958ubiquitin-40S ribosomal protein S27a-like. (157 aa)
EIF3KEukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (253 aa)
RPS2940S ribosomal protein S29. (56 aa)
RPS1440S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
RPS1340S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
Your Current Organism:
Neophocaena asiaeorientalis
NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise
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