STRINGSTRING
NOCT NOCT SMPD2 SMPD2 ANGEL1 ANGEL1 PDE12 PDE12 ANGEL2 ANGEL2 TDP2 TDP2 APEX2 APEX2 CNOT6 CNOT6 APEX1 APEX1 CNOT6L CNOT6L
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NOCTNocturnin. (362 aa)
SMPD2Sphingomyelin phosphodiesterase 2. (423 aa)
ANGEL1Protein angel homolog 1. (668 aa)
PDE122',5'-phosphodiesterase 12. (609 aa)
ANGEL2Protein angel homolog 2 isoform X1. (544 aa)
TDP2tyrosyl-DNA phosphodiesterase 2 isoform X1. (384 aa)
APEX2DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (575 aa)
CNOT6CCR4-NOT transcription complex subunit 6 isoform X1. (557 aa)
APEX1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (318 aa)
CNOT6LCCR4-NOT transcription complex subunit 6-like isoform X3. (577 aa)
Your Current Organism:
Neophocaena asiaeorientalis
NCBI taxonomy Id: 1706337
Other names: N. asiaeorientalis asiaeorientalis, Neophocaena asiaeorientalis asiaeorientalis, Yangtze finless porpoise
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