STRINGSTRING
AOT82_1241 AOT82_1241 AOT82_130 AOT82_130 AOT82_1300 AOT82_1300 AOT82_1301 AOT82_1301 AOT82_1762 AOT82_1762 AOT82_1821 AOT82_1821 dnaG dnaG priA priA AOT82_2551 AOT82_2551 AOT82_308 AOT82_308 dnaX dnaX AOT82_533 AOT82_533 rnhA rnhA AOT82_882 AOT82_882
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AOT82_1241Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. (204 aa)
AOT82_130DNA polymerase III subunit delta'. (376 aa)
AOT82_1300Hypothetical protein. (648 aa)
AOT82_1301Exonuclease, DNA polymerase III, epsilon subunit family domain protein. (201 aa)
AOT82_1762Hypothetical protein. (155 aa)
AOT82_1821DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (391 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family. (741 aa)
priAPrimosome assembly protein PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (762 aa)
AOT82_2551DNA polymerase III subunit delta. (361 aa)
AOT82_308DNA polymerase III, alpha chain. (1239 aa)
dnaXDNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (655 aa)
AOT82_533Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (467 aa)
rnhADNA polymerase III subunit epsilon; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (546 aa)
AOT82_882single-stranded-DNA-specific exonuclease. (612 aa)
Your Current Organism:
Psychrobacter sp. AntiMn1
NCBI taxonomy Id: 1720344
Other names: P. sp. AntiMn-1, Psychrobacter sp. AntiMn-1
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