Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AOT82_1541 | AOT82_1604 | AOT82_1541 | AOT82_1604 | Hypothetical protein. | Phosphomethylpyrimidine kinase. | 0.778 |
| AOT82_1541 | AOT82_920 | AOT82_1541 | AOT82_920 | Hypothetical protein. | Thiamine-phosphate pyrophosphorylase. | 0.752 |
| AOT82_1541 | thiC | AOT82_1541 | AOT82_1711 | Hypothetical protein. | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.791 |
| AOT82_1541 | thiG | AOT82_1541 | AOT82_1514 | Hypothetical protein. | ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.994 |
| AOT82_1604 | AOT82_1541 | AOT82_1604 | AOT82_1541 | Phosphomethylpyrimidine kinase. | Hypothetical protein. | 0.778 |
| AOT82_1604 | AOT82_920 | AOT82_1604 | AOT82_920 | Phosphomethylpyrimidine kinase. | Thiamine-phosphate pyrophosphorylase. | 0.990 |
| AOT82_1604 | thiC | AOT82_1604 | AOT82_1711 | Phosphomethylpyrimidine kinase. | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.990 |
| AOT82_1604 | thiG | AOT82_1604 | AOT82_1514 | Phosphomethylpyrimidine kinase. | ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.905 |
| AOT82_1604 | thiL | AOT82_1604 | AOT82_1926 | Phosphomethylpyrimidine kinase. | Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.423 |
| AOT82_1653 | AOT82_327 | AOT82_1653 | AOT82_327 | Hypothetical protein. | Hypothetical protein. | 0.900 |
| AOT82_327 | AOT82_1653 | AOT82_327 | AOT82_1653 | Hypothetical protein. | Hypothetical protein. | 0.900 |
| AOT82_920 | AOT82_1541 | AOT82_920 | AOT82_1541 | Thiamine-phosphate pyrophosphorylase. | Hypothetical protein. | 0.752 |
| AOT82_920 | AOT82_1604 | AOT82_920 | AOT82_1604 | Thiamine-phosphate pyrophosphorylase. | Phosphomethylpyrimidine kinase. | 0.990 |
| AOT82_920 | thiC | AOT82_920 | AOT82_1711 | Thiamine-phosphate pyrophosphorylase. | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.857 |
| AOT82_920 | thiG | AOT82_920 | AOT82_1514 | Thiamine-phosphate pyrophosphorylase. | ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.944 |
| AOT82_920 | thiL | AOT82_920 | AOT82_1926 | Thiamine-phosphate pyrophosphorylase. | Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.930 |
| dxs | thiG | AOT82_1517 | AOT82_1514 | 1-deoxyxylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.927 |
| thiC | AOT82_1541 | AOT82_1711 | AOT82_1541 | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | Hypothetical protein. | 0.791 |
| thiC | AOT82_1604 | AOT82_1711 | AOT82_1604 | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | Phosphomethylpyrimidine kinase. | 0.990 |
| thiC | AOT82_920 | AOT82_1711 | AOT82_920 | Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | Thiamine-phosphate pyrophosphorylase. | 0.857 |
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