STRINGSTRING
B4V02_00080 B4V02_00080 B4V02_00085 B4V02_00085 B4V02_00090 B4V02_00090 B4V02_20995 B4V02_20995 B4V02_21000 B4V02_21000 B4V02_21005 B4V02_21005 B4V02_21010 B4V02_21010 B4V02_21015 B4V02_21015 B4V02_24750 B4V02_24750 tadA tadA B4V02_24740 B4V02_24740 B4V02_24735 B4V02_24735 cmk cmk B4V02_10390 B4V02_10390 der der plsY plsY gpsA gpsA B4V02_10415 B4V02_10415 B4V02_10420 B4V02_10420 B4V02_10425 B4V02_10425
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
B4V02_00080Unannotated protein. (304 aa)
B4V02_00085Unannotated protein. (180 aa)
B4V02_00090Unannotated protein. (113 aa)
B4V02_20995Unannotated protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (623 aa)
B4V02_21000Unannotated protein. (293 aa)
B4V02_21005Unannotated protein. (259 aa)
B4V02_21010Unannotated protein. (96 aa)
B4V02_21015Unannotated protein. (177 aa)
B4V02_24750Unannotated protein. (188 aa)
tadAUnannotated protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (166 aa)
B4V02_24740Unannotated protein. (758 aa)
B4V02_24735Unannotated protein; Belongs to the pseudouridine synthase RsuA family. (233 aa)
cmkUnannotated protein. (235 aa)
B4V02_10390Unannotated protein. (197 aa)
derUnannotated protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. (440 aa)
plsYUnannotated protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. (202 aa)
gpsAUnannotated protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (346 aa)
B4V02_10415Unannotated protein. (91 aa)
B4V02_10420Unannotated protein. (216 aa)
B4V02_10425Unannotated protein. (116 aa)
Your Current Organism:
Paenibacillus kribbensis
NCBI taxonomy Id: 172713
Other names: JCM 11465, KCTC 0766BP, P. kribbensis, Paenibacillus kribbensis Yoon et al. 2003, strain AM49
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