STRINGSTRING
ALL08737.1 ALL08737.1 nadA nadA hutI hutI ALL04121.1 ALL04121.1 ALL04127.1 ALL04127.1 ALL04183.1 ALL04183.1 ALL04213.1 ALL04213.1 ALL04214.1 ALL04214.1 ALL04226.1 ALL04226.1 aroE aroE ALL04442.1 ALL04442.1 ALL04470.1 ALL04470.1 aroK aroK dapB dapB ALL04716.1 ALL04716.1 dapA dapA ALL04902.1 ALL04902.1 ALL05030.1 ALL05030.1 ALL05070.1 ALL05070.1 ALL05123.1 ALL05123.1 ALL05238.1 ALL05238.1 ALL05449.1 ALL05449.1 ALL05740.1 ALL05740.1 ALL05852.1 ALL05852.1 kynU kynU ALL06165.1 ALL06165.1 ALL06255.1 ALL06255.1 ALL06501.1 ALL06501.1 gltD gltD aroQ aroQ ALL06586.1 ALL06586.1 ALL06646.1 ALL06646.1 ALL06832.1 ALL06832.1 ALL07056.1 ALL07056.1 ALL07089.1 ALL07089.1 ALL07119.1 ALL07119.1 lysA lysA ALL07124.1 ALL07124.1 ALL07140.1 ALL07140.1 ALL07233.1 ALL07233.1 ALL08880.1 ALL08880.1 ALL07326.1 ALL07326.1 ALL07553.1 ALL07553.1 ALL07630.1 ALL07630.1 ALL07633.1 ALL07633.1 aroA aroA aroC aroC ALL07716.1 ALL07716.1 ALL08042.1 ALL08042.1 ALL08169.1 ALL08169.1 ALL08382.1 ALL08382.1 ALL08389.1 ALL08389.1 dapF dapF ALL08987.1 ALL08987.1 hutU hutU fumC fumC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALL08737.1Isochorismate-pyruvate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (102 aa)
nadAQuinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. (330 aa)
hutIImidazolonepropionase; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)
ALL04121.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (466 aa)
ALL04127.1Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. (863 aa)
ALL04183.1Acetylornithine deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
ALL04213.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (439 aa)
ALL04214.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (908 aa)
ALL04226.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (512 aa)
aroEAroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
ALL04442.1Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology. (771 aa)
ALL04470.1Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (815 aa)
aroKShikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (168 aa)
dapB4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (246 aa)
ALL04716.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)
dapA4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (293 aa)
ALL04902.1Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family. (507 aa)
ALL05030.1Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Derived by automated computational analysis using gene prediction method: Protein Homology. (501 aa)
ALL05070.12-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)
ALL05123.1Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family. (554 aa)
ALL05238.1Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. (425 aa)
ALL05449.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)
ALL05740.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1080 aa)
ALL05852.1Iron-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (74 aa)
kynUKynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (429 aa)
ALL06165.12-polyprenyl-6-methoxyphenol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
ALL06255.1Succinate-semialdehyde dehydrogenase; In Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)
ALL06501.1Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1501 aa)
gltDGlutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
aroQ3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. (139 aa)
ALL06586.1Dihydrodipicolinate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DapA family. (309 aa)
ALL06646.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (541 aa)
ALL06832.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
ALL07056.1Succinate-semialdehyde dehydrogenase; In Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)
ALL07089.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa)
ALL07119.1Dihydroneopterin aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (125 aa)
lysADiaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (385 aa)
ALL07124.1Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. (437 aa)
ALL07140.1Succinate-semialdehyde dehydrogenase; In Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (455 aa)
ALL07233.1Dihydrodipicolinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DapA family. (299 aa)
ALL08880.1Acetylornithine deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)
ALL07326.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (472 aa)
ALL07553.1FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (511 aa)
ALL07630.1Proline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
ALL07633.1Cytochrome C4; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
aroA3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. (417 aa)
aroCChorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (364 aa)
ALL07716.1Peptidase dimerization domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)
ALL08042.12,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transferase hexapeptide repeat family. (272 aa)
ALL08169.11-pyrroline-5-carboxylate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa)
ALL08382.1N-acyl-L-amino acid amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa)
ALL08389.1N-acyl-L-amino acid amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)
dapFDiaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (261 aa)
ALL08987.1Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (504 aa)
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (550 aa)
fumCFumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (465 aa)
Your Current Organism:
Pedobacter sp. PACM27299
NCBI taxonomy Id: 1727164
Other names: P. sp. PACM 27299, Pedobacter sp. PACM 27299
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