STRINGSTRING
ALL04093.1 ALL04093.1 ALL04104.1 ALL04104.1 ALL04178.1 ALL04178.1 argH argH ALL04186.1 ALL04186.1 ALL04944.1 ALL04944.1 ALL05084.1 ALL05084.1 ALL05156.1 ALL05156.1 ALL05230.1 ALL05230.1 aspA aspA ansB ansB ALL08690.1 ALL08690.1 ALL05777.1 ALL05777.1 ALL08731.1 ALL08731.1 ALL08732.1 ALL08732.1 ALL05987.1 ALL05987.1 ALL06255.1 ALL06255.1 ALL06501.1 ALL06501.1 gltD gltD ALL07056.1 ALL07056.1 ALL07140.1 ALL07140.1 ALL07638.1 ALL07638.1 ALL07662.1 ALL07662.1 purA purA pyrB pyrB ALL08001.1 ALL08001.1 ALL08947.1 ALL08947.1 carA carA ALL08169.1 ALL08169.1 ALL08246.1 ALL08246.1 ALL08492.1 ALL08492.1 glmS glmS ALL08534.1 ALL08534.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ALL04093.1L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. (528 aa)
ALL04104.1Alanine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
ALL04178.1Argininosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (397 aa)
argHArgininosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa)
ALL04186.1Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
ALL04944.1Glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (473 aa)
ALL05084.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (560 aa)
ALL05156.1Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family. (728 aa)
ALL05230.1Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (448 aa)
aspAAspartate ammonia-lyase; Catalyzes the formation of fumarate from aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology. (469 aa)
ansBL-asparaginase; Catalyzes the formation of aspartate from asparagine, periplasmic; regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the asparaginase 1 family. (348 aa)
ALL08690.1Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
ALL05777.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa)
ALL08731.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
ALL08732.1Aspartate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/glutamate racemases family. (231 aa)
ALL05987.1Converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (446 aa)
ALL06255.1Succinate-semialdehyde dehydrogenase; In Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)
ALL06501.1Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1501 aa)
gltDGlutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa)
ALL07056.1Succinate-semialdehyde dehydrogenase; In Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)
ALL07140.1Succinate-semialdehyde dehydrogenase; In Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (455 aa)
ALL07638.1Aspartate aminotransferase; Catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
ALL07662.1Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family. (452 aa)
purAAdenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (425 aa)
pyrBAspartate carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (310 aa)
ALL08001.1Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (633 aa)
ALL08947.1Isoaspartyl peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
carACarbamoyl phosphate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarA family. (370 aa)
ALL08169.11-pyrroline-5-carboxylate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa)
ALL08246.1L-asparaginase 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)
ALL08492.1Asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
glmSGlutamine amidotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (612 aa)
ALL08534.1Carbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (938 aa)
Your Current Organism:
Pedobacter sp. PACM27299
NCBI taxonomy Id: 1727164
Other names: P. sp. PACM 27299, Pedobacter sp. PACM 27299
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