(19 nodes) Mixed, incl. DJ-1/PfpI family, and OsmC/Ohr family network (Salegentibacter sp. T436)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	menG	Ubiquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). (242 aa)
	APS37450.1	Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)
	APS38018.1	Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)
	APS38617.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
	APS38618.1	MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)
	APS38619.1	NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)
	APS38620.1	NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
	APS40734.1	Dimethylallyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
	APS38621.1	Histone H1; Derived by automated computational analysis using gene prediction method: Protein Homology. (58 aa)
	AO058_08900	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
	APS39030.1	Ohr subfamily peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)
	APS39366.1	NAD(P)H:quinone oxidoreductase, type IV; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WrbA family. (200 aa)
	katE	Hydroperoxidase; Serves to protect cells from the toxic effects of hydrogen peroxide. (716 aa)
	APS39935.1	Osmotically inducible protein OsmC; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)
	APS40065.1	Trehalose-6-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (737 aa)
	APS40086.1	Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa)
	APS40133.1	Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (192 aa)
	APS40134.1	Glucose-fructose oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
	APS40506.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa)

Your Current Organism:

Salegentibacter sp. T436

NCBI taxonomy Id: 1729720
Other names: S. sp. T436

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AO058_08900	APS38018.1	AO058_08900	AO058_03570	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.519
AO058_08900	APS40065.1	AO058_08900	AO058_14790	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Trehalose-6-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.650
AO058_08900	katE	AO058_08900	AO058_12140	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hydroperoxidase; Serves to protect cells from the toxic effects of hydrogen peroxide.	0.482
APS37450.1	APS39935.1	AO058_00465	AO058_14085	Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Osmotically inducible protein OsmC; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.768
APS37450.1	APS40065.1	AO058_00465	AO058_14790	Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	Trehalose-6-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.649
APS38018.1	AO058_08900	AO058_03570	AO058_08900	Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.519
APS38018.1	APS39366.1	AO058_03570	AO058_10985	Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD(P)H:quinone oxidoreductase, type IV; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WrbA family.	0.519
APS38018.1	APS40065.1	AO058_03570	AO058_14790	Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.	Trehalose-6-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.824
APS38018.1	APS40506.1	AO058_03570	AO058_17210	Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.959
APS38617.1	APS38618.1	AO058_06825	AO058_06830	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.866
APS38617.1	APS38619.1	AO058_06825	AO058_06835	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.578
APS38617.1	APS38620.1	AO058_06825	AO058_06840	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.403
APS38618.1	APS38617.1	AO058_06830	AO058_06825	MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.866
APS38618.1	APS38619.1	AO058_06830	AO058_06835	MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.613
APS38618.1	APS38620.1	AO058_06830	AO058_06840	MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.413
APS38618.1	APS39030.1	AO058_06830	AO058_09175	MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ohr subfamily peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.918
APS38619.1	APS38617.1	AO058_06835	AO058_06825	NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.578
APS38619.1	APS38618.1	AO058_06835	AO058_06830	NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.613
APS38619.1	APS38620.1	AO058_06835	AO058_06840	NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.748
APS38619.1	APS40734.1	AO058_06835	AO058_06845	NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dimethylallyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.558