37 items (Xanthomonas sp. Leaf148) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KQR17952.1	Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (651 aa)
	KQR18019.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (690 aa)
	KQR18665.1	Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (114 aa)
	KQR18021.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (951 aa)
	KQR18680.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (571 aa)
	KQR18325.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (573 aa)
	KQR18392.1	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)
	KQR18393.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1060 aa)
	KQR18396.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa)
	KQR18401.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (651 aa)
	KQR18582.1	PAS domain-containing sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)
	KQR12504.1	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1149 aa)
	KQR13853.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (458 aa)
	KQR12943.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (677 aa)
	KQR12952.1	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (579 aa)
	KQR13380.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)
	KQR13405.1	Two-component system sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (2364 aa)
	KQR13469.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1188 aa)
	KQR13470.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1182 aa)
	KQR13619.1	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (427 aa)
	KQR11366.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (500 aa)
	KQR11562.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)
	KQR11563.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (636 aa)
	KQR10664.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (540 aa)
	KQR10733.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1364 aa)
	KQR08898.1	Phytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology. (634 aa)
	KQR09123.1	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (582 aa)
	KQR09056.1	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (506 aa)
	KQR09058.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (763 aa)
	KQR07847.1	Response regulator receiver protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (654 aa)
	KQR07848.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (765 aa)
	KQR07477.1	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1256 aa)
	KQR07657.1	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (603 aa)
	KQR07586.1	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (697 aa)
	KQR07587.1	c-di-GMP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (573 aa)
	KQR07639.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (695 aa)
	KQR15884.1	c-di-GMP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (754 aa)

Your Current Organism:

Xanthomonas sp. Leaf148

NCBI taxonomy Id: 1736275
Other names: X. sp. Leaf148

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KQR07477.1	KQR07586.1	ASF90_18890	ASF90_19540	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
KQR07477.1	KQR07587.1	ASF90_18890	ASF90_19545	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	c-di-GMP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
KQR07477.1	KQR07639.1	ASF90_18890	ASF90_19815	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
KQR07477.1	KQR07657.1	ASF90_18890	ASF90_19305	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
KQR07477.1	KQR07847.1	ASF90_18890	ASF90_16910	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Response regulator receiver protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KQR07477.1	KQR07848.1	ASF90_18890	ASF90_16915	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQR07477.1	KQR08898.1	ASF90_18890	ASF90_15180	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQR07477.1	KQR09056.1	ASF90_18890	ASF90_16070	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQR07477.1	KQR09058.1	ASF90_18890	ASF90_16080	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQR07477.1	KQR09123.1	ASF90_18890	ASF90_15525	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
KQR07477.1	KQR10664.1	ASF90_18890	ASF90_13930	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQR07477.1	KQR10733.1	ASF90_18890	ASF90_14305	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQR07477.1	KQR11366.1	ASF90_18890	ASF90_12300	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
KQR07477.1	KQR11562.1	ASF90_18890	ASF90_13390	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
KQR07477.1	KQR11563.1	ASF90_18890	ASF90_13395	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQR07477.1	KQR12504.1	ASF90_18890	ASF90_04330	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQR07477.1	KQR12943.1	ASF90_18890	ASF90_06830	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQR07477.1	KQR12952.1	ASF90_18890	ASF90_06880	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQR07477.1	KQR13380.1	ASF90_18890	ASF90_09340	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQR07477.1	KQR13405.1	ASF90_18890	ASF90_09475	Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Two-component system sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999