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rpsT | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (87 aa) | ||||
rpmE2 | 50S ribosomal protein L31 type B; Derived by automated computational analysis using gene prediction method: Protein Homology. (84 aa) | ||||
rpmB | 50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. (78 aa) | ||||
rpmG | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. (55 aa) | ||||
rpsU | 30S ribosomal protein S21; A small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family. (71 aa) |
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rpmB | rpmE2 | ASG75_09185 | ASG75_08240 | 50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. | 50S ribosomal protein L31 type B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
rpmB | rpmG | ASG75_09185 | ASG75_09190 | 50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
rpmB | rpsT | ASG75_09185 | ASG75_05370 | 50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.998 |
rpmB | rpsU | ASG75_09185 | ASG75_14625 | 50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. | 30S ribosomal protein S21; A small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family. | 0.998 |
rpmE2 | rpmB | ASG75_08240 | ASG75_09185 | 50S ribosomal protein L31 type B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. | 0.998 |
rpmE2 | rpmG | ASG75_08240 | ASG75_09190 | 50S ribosomal protein L31 type B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
rpmE2 | rpsT | ASG75_08240 | ASG75_05370 | 50S ribosomal protein L31 type B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.998 |
rpmE2 | rpsU | ASG75_08240 | ASG75_14625 | 50S ribosomal protein L31 type B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S21; A small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family. | 0.995 |
rpmG | rpmB | ASG75_09190 | ASG75_09185 | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. | 0.999 |
rpmG | rpmE2 | ASG75_09190 | ASG75_08240 | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L31 type B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
rpmG | rpsT | ASG75_09190 | ASG75_05370 | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.997 |
rpmG | rpsU | ASG75_09190 | ASG75_14625 | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S21; A small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family. | 0.996 |
rpsT | rpmB | ASG75_05370 | ASG75_09185 | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. | 0.998 |
rpsT | rpmE2 | ASG75_05370 | ASG75_08240 | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 50S ribosomal protein L31 type B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
rpsT | rpmG | ASG75_05370 | ASG75_09190 | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.997 |
rpsT | rpsU | ASG75_05370 | ASG75_14625 | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 30S ribosomal protein S21; A small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family. | 0.998 |
rpsU | rpmB | ASG75_14625 | ASG75_09185 | 30S ribosomal protein S21; A small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family. | 50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. | 0.998 |
rpsU | rpmE2 | ASG75_14625 | ASG75_08240 | 30S ribosomal protein S21; A small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family. | 50S ribosomal protein L31 type B; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.995 |
rpsU | rpmG | ASG75_14625 | ASG75_09190 | 30S ribosomal protein S21; A small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family. | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.996 |
rpsU | rpsT | ASG75_14625 | ASG75_05370 | 30S ribosomal protein S21; A small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.998 |