(4 nodes) Histidine Phosphotransfer domain network (Phycicoccus sp. Root563)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KQZ90069.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1119 aa)
	KQZ89440.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (743 aa)
	KQZ88105.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1414 aa)
	KQZ90072.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (105 aa)

Your Current Organism:

Phycicoccus sp. Root563

NCBI taxonomy Id: 1736562
Other names: P. sp. Root563

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KQZ88105.1	KQZ89440.1	ASD62_00995	ASD62_09115	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQZ88105.1	KQZ90069.1	ASD62_00995	ASD62_12940	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQZ89440.1	KQZ88105.1	ASD62_09115	ASD62_00995	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQZ89440.1	KQZ90069.1	ASD62_09115	ASD62_12940	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQZ90069.1	KQZ88105.1	ASD62_12940	ASD62_00995	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQZ90069.1	KQZ89440.1	ASD62_12940	ASD62_09115	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KQZ90069.1	KQZ90072.1	ASD62_12940	ASD62_12955	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.400
KQZ90072.1	KQZ90069.1	ASD62_12955	ASD62_12940	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.400