(24 nodes) AMP-binding enzyme network (Bacillus sp. FJAT25496)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GCA_001439625_02341	Unannotated protein. (261 aa)
	FSZ17_11780	Unannotated protein. (550 aa)
	menE	Unannotated protein. (496 aa)
	GCA_001439625_01495	Unannotated protein. (985 aa)
	FSZ17_07085	Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family. (2180 aa)
	FSZ17_13560	Unannotated protein. (517 aa)
	FSZ17_07090	Unannotated protein. (1839 aa)
	FSZ17_07095	Unannotated protein. (2080 aa)
	FSZ17_07100	Unannotated protein. (988 aa)
	GCA_001439625_02309	Unannotated protein. (1458 aa)
	GCA_001439625_02310	Unannotated protein. (264 aa)
	GCA_001439625_02342	Unannotated protein. (99 aa)
	GCA_001439625_02343	Unannotated protein. (81 aa)
	FSZ17_17195	Unannotated protein. (566 aa)
	FSZ17_17660	Unannotated protein. (527 aa)
	acsA	Unannotated protein. (572 aa)
	FSZ17_17875	Unannotated protein. (525 aa)
	menE-2	Unannotated protein; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily. (496 aa)
	FSZ17_07980	Unannotated protein. (531 aa)
	FSZ17_07925	Unannotated protein. (503 aa)
	FSZ17_07795	Unannotated protein. (518 aa)
	FSZ17_07590	Unannotated protein. (540 aa)
	GCA_001439625_04046	Unannotated protein. (963 aa)
	FSZ17_04245	Unannotated protein. (462 aa)

Your Current Organism:

Bacillus sp. FJAT25496

NCBI taxonomy Id: 1742359
Other names: B. sp. FJAT-25496, Bacillus sp. FJAT-25496

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FSZ17_04245	FSZ17_07085	GCA_001439625_04585	GCA_001439625_01496	Unannotated protein.	Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family.	0.406
FSZ17_04245	FSZ17_07090	GCA_001439625_04585	GCA_001439625_02285	Unannotated protein.	Unannotated protein.	0.562
FSZ17_04245	FSZ17_07095	GCA_001439625_04585	GCA_001439625_02286	Unannotated protein.	Unannotated protein.	0.562
FSZ17_04245	FSZ17_11780	GCA_001439625_04585	GCA_001439625_00802	Unannotated protein.	Unannotated protein.	0.619
FSZ17_04245	FSZ17_13560	GCA_001439625_04585	GCA_001439625_01780	Unannotated protein.	Unannotated protein.	0.429
FSZ17_04245	FSZ17_17660	GCA_001439625_04585	GCA_001439625_02703	Unannotated protein.	Unannotated protein.	0.723
FSZ17_04245	GCA_001439625_02310	GCA_001439625_04585	GCA_001439625_02310	Unannotated protein.	Unannotated protein.	0.562
FSZ17_04245	GCA_001439625_04046	GCA_001439625_04585	GCA_001439625_04046	Unannotated protein.	Unannotated protein.	0.562
FSZ17_04245	acsA	GCA_001439625_04585	GCA_001439625_02719	Unannotated protein.	Unannotated protein.	0.619
FSZ17_07085	FSZ17_04245	GCA_001439625_01496	GCA_001439625_04585	Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family.	Unannotated protein.	0.406
FSZ17_07085	FSZ17_07090	GCA_001439625_01496	GCA_001439625_02285	Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family.	Unannotated protein.	0.999
FSZ17_07085	FSZ17_07095	GCA_001439625_01496	GCA_001439625_02286	Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family.	Unannotated protein.	0.999
FSZ17_07085	FSZ17_07100	GCA_001439625_01496	GCA_001439625_02308	Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family.	Unannotated protein.	0.961
FSZ17_07085	FSZ17_07590	GCA_001439625_01496	GCA_001439625_03949	Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family.	Unannotated protein.	0.952
FSZ17_07085	FSZ17_07795	GCA_001439625_01496	GCA_001439625_03912	Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family.	Unannotated protein.	0.955
FSZ17_07085	FSZ17_07925	GCA_001439625_01496	GCA_001439625_03886	Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family.	Unannotated protein.	0.956
FSZ17_07085	FSZ17_07980	GCA_001439625_01496	GCA_001439625_03875	Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family.	Unannotated protein.	0.954
FSZ17_07085	FSZ17_11780	GCA_001439625_01496	GCA_001439625_00802	Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family.	Unannotated protein.	0.952
FSZ17_07085	FSZ17_13560	GCA_001439625_01496	GCA_001439625_01780	Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family.	Unannotated protein.	0.955
FSZ17_07085	FSZ17_17195	GCA_001439625_01496	GCA_001439625_02609	Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family.	Unannotated protein.	0.952