STRINGSTRING
ANJ00645.1 ANJ00645.1 ANI98735.1 ANI98735.1 bamE bamE lptE lptE ANI98864.1 ANI98864.1 cpoB cpoB ANI98925.1 ANI98925.1 ANI98940.1 ANI98940.1 ANI98946.1 ANI98946.1 bamA bamA ANI99123.1 ANI99123.1 ANI99221.1 ANI99221.1 ANI99248.1 ANI99248.1 ANI99306.1 ANI99306.1 ANI99307.1 ANI99307.1 ANI99311.1 ANI99311.1 ANI99314.1 ANI99314.1 bamB bamB ANI99360.1 ANI99360.1 ANI99443.1 ANI99443.1 ANI99511.1 ANI99511.1 bamD bamD ANI99615.1 ANI99615.1 ANI99629.1 ANI99629.1 ANI99646.1 ANI99646.1 ANI99698.1 ANI99698.1 ANI99722.1 ANI99722.1 ANI99744.1 ANI99744.1 ANI99792.1 ANI99792.1 ANI99848.1 ANI99848.1 ANI99883.1 ANI99883.1 ANI99920.1 ANI99920.1 ANJ00780.1 ANJ00780.1 ANI99978.1 ANI99978.1 ANJ00054.1 ANJ00054.1 dnaK dnaK surA surA lptD lptD ANJ00833.1 ANJ00833.1 ANJ00504.1 ANJ00504.1 ANJ00531.1 ANJ00531.1 ANJ00613.1 ANJ00613.1 ANJ00614.1 ANJ00614.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ANJ00645.1Type II and III secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family. (358 aa)
ANI98735.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)
bamECell envelope protein SmpA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (243 aa)
lptEHypothetical protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family. (175 aa)
ANI98864.1Type I secretion protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology. (539 aa)
cpoBTol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family. (221 aa)
ANI98925.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (723 aa)
ANI98940.1Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)
ANI98946.1Lipocalin; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids. (193 aa)
bamAOuter membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (761 aa)
ANI99123.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the skp family. (174 aa)
ANI99221.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
ANI99248.1Molybdate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
ANI99306.1Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa)
ANI99307.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (500 aa)
ANI99311.1Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
ANI99314.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (184 aa)
bamBOuter membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (384 aa)
ANI99360.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (222 aa)
ANI99443.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (382 aa)
ANI99511.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (696 aa)
bamDCompetence protein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (281 aa)
ANI99615.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa)
ANI99629.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)
ANI99646.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (703 aa)
ANI99698.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (402 aa)
ANI99722.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
ANI99744.1Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
ANI99792.1Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (622 aa)
ANI99848.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (734 aa)
ANI99883.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (684 aa)
ANI99920.1N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)
ANJ00780.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
ANI99978.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa)
ANJ00054.1Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (176 aa)
dnaKMolecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. (643 aa)
surAPeptidylprolyl isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. (472 aa)
lptDOrganic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (841 aa)
ANJ00833.1Organic solvent tolerance protein OstA; Derived by automated computational analysis using gene prediction method: Protein Homology. (175 aa)
ANJ00504.1Hypothetical protein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. (495 aa)
ANJ00531.1Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. (477 aa)
ANJ00613.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
ANJ00614.1Molybdenum ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
Your Current Organism:
Polynucleobacter wuianus
NCBI taxonomy Id: 1743168
Other names: CIP 111100, DSM 24008, P. wuianus, Polynucleobacter sp. QLW-P1FAT50C-4, Polynucleobacter wuianus Hahn et al. 2017, strain QLW-P1FAT50C-4
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