STRINGSTRING
Tel_00265 Tel_00265 Tel_01615 Tel_01615 Tel_01945 Tel_01945 Tel_02060 Tel_02060 Tel_02390 Tel_02390 Tel_03045 Tel_03045 dcd dcd Tel_07895 Tel_07895 pyrG pyrG Tel_08720 Tel_08720 cpdA cpdA ndk ndk
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tel_00265(p)ppGpp synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (727 aa)
Tel_01615Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (688 aa)
Tel_01945Nucleoside triphosphate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
Tel_02060Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (740 aa)
Tel_02390Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (959 aa)
Tel_03045Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (136 aa)
dcdDeoxycytidine triphosphate deaminase; Catalyzes the deamination of dCTP to dUTP. (188 aa)
Tel_07895Hypothetical protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (741 aa)
pyrGCTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. (537 aa)
Tel_08720Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
cpdAHypothetical protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes. (267 aa)
ndkNucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. (141 aa)
Your Current Organism:
Tenderia electrophaga
NCBI taxonomy Id: 1748243
Other names: C. Tenderia electrophaga, Candidatus Tenderia electrophaga, Gammaproteobacteria bacterium NRL1
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