(9 nodes) Cobalamin transport network (Tenderia electrophaga)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Tel_06815	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
	Tel_00960	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)
	Tel_00990	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (607 aa)
	Tel_06420	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (687 aa)
	cobQ	Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (491 aa)
	cobD	Cobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (299 aa)
	Tel_06830	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
	Tel_06850	Ligand-gated channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (601 aa)
	Tel_12975	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (696 aa)

Your Current Organism:

Tenderia electrophaga

NCBI taxonomy Id: 1748243
Other names: C. Tenderia electrophaga, Candidatus Tenderia electrophaga, Gammaproteobacteria bacterium NRL1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Tel_06815	Tel_06830	Tel_06815	Tel_06830	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.831
Tel_06815	Tel_06850	Tel_06815	Tel_06850	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ligand-gated channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.612
Tel_06815	cobD	Tel_06815	Tel_06825	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.	0.817
Tel_06815	cobQ	Tel_06815	Tel_06810	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.	0.814
Tel_06830	Tel_06815	Tel_06830	Tel_06815	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.831
Tel_06830	Tel_06850	Tel_06830	Tel_06850	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ligand-gated channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.631
Tel_06830	cobD	Tel_06830	Tel_06825	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.	0.797
Tel_06830	cobQ	Tel_06830	Tel_06810	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.	0.812
Tel_06850	Tel_06815	Tel_06850	Tel_06815	Ligand-gated channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.612
Tel_06850	Tel_06830	Tel_06850	Tel_06830	Ligand-gated channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.631
Tel_06850	cobD	Tel_06850	Tel_06825	Ligand-gated channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.	0.511
Tel_06850	cobQ	Tel_06850	Tel_06810	Ligand-gated channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.	0.532
cobD	Tel_06815	Tel_06825	Tel_06815	Cobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.817
cobD	Tel_06830	Tel_06825	Tel_06830	Cobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.797
cobD	Tel_06850	Tel_06825	Tel_06850	Cobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.	Ligand-gated channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.511
cobD	cobQ	Tel_06825	Tel_06810	Cobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.	Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.	0.999
cobQ	Tel_06815	Tel_06810	Tel_06815	Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.814
cobQ	Tel_06830	Tel_06810	Tel_06830	Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.812
cobQ	Tel_06850	Tel_06810	Tel_06850	Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.	Ligand-gated channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.532
cobQ	cobD	Tel_06810	Tel_06825	Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.	Cobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.	0.999