(5 nodes) Cytochrome c-like domain network (Fischerella sp. NIES3754)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	petJ	Cytochrome c6; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis. (111 aa)
	psbV	Cytochrome c, class I; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II. (163 aa)
	BAU05147.1	Cytochrome c, class I; Similar to AA sequence:cyanobase_aa:Npun_R2788. (114 aa)
	BAU05255.1	Similar to AA sequence:cyanobase_aa:Ava_1529. (113 aa)
	BAU05526.1	Similar to AA sequence:cyanobase_aa:Ava_4020. (114 aa)

Your Current Organism:

Fischerella sp. NIES3754

NCBI taxonomy Id: 1752063
Other names: F. sp. NIES-3754, Fischerella sp. NIES-3754

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BAU05147.1	BAU05255.1	FIS3754_10410	FIS3754_11490	Cytochrome c, class I; Similar to AA sequence:cyanobase_aa:Npun_R2788.	Similar to AA sequence:cyanobase_aa:Ava_1529.	0.909
BAU05147.1	petJ	FIS3754_10410	FIS3754_19730	Cytochrome c, class I; Similar to AA sequence:cyanobase_aa:Npun_R2788.	Cytochrome c6; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis.	0.906
BAU05147.1	psbV	FIS3754_10410	FIS3754_10390	Cytochrome c, class I; Similar to AA sequence:cyanobase_aa:Npun_R2788.	Cytochrome c, class I; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II.	0.857
BAU05255.1	BAU05147.1	FIS3754_11490	FIS3754_10410	Similar to AA sequence:cyanobase_aa:Ava_1529.	Cytochrome c, class I; Similar to AA sequence:cyanobase_aa:Npun_R2788.	0.909
BAU05255.1	petJ	FIS3754_11490	FIS3754_19730	Similar to AA sequence:cyanobase_aa:Ava_1529.	Cytochrome c6; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis.	0.904
BAU05255.1	psbV	FIS3754_11490	FIS3754_10390	Similar to AA sequence:cyanobase_aa:Ava_1529.	Cytochrome c, class I; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II.	0.781
petJ	BAU05147.1	FIS3754_19730	FIS3754_10410	Cytochrome c6; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis.	Cytochrome c, class I; Similar to AA sequence:cyanobase_aa:Npun_R2788.	0.906
petJ	BAU05255.1	FIS3754_19730	FIS3754_11490	Cytochrome c6; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis.	Similar to AA sequence:cyanobase_aa:Ava_1529.	0.904
petJ	psbV	FIS3754_19730	FIS3754_10390	Cytochrome c6; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis.	Cytochrome c, class I; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II.	0.876
psbV	BAU05147.1	FIS3754_10390	FIS3754_10410	Cytochrome c, class I; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II.	Cytochrome c, class I; Similar to AA sequence:cyanobase_aa:Npun_R2788.	0.857
psbV	BAU05255.1	FIS3754_10390	FIS3754_11490	Cytochrome c, class I; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II.	Similar to AA sequence:cyanobase_aa:Ava_1529.	0.781
psbV	petJ	FIS3754_10390	FIS3754_19730	Cytochrome c, class I; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II.	Cytochrome c6; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis.	0.876