STRINGSTRING
CEW89_11815 CEW89_11815 queA queA murI murI alr alr glmM glmM rpiA rpiA rpiB rpiB truB truB truA truA trpF trpF CEW89_16785 CEW89_16785 CEW89_16765 CEW89_16765 CEW89_01195 CEW89_01195 CEW89_01135 CEW89_01135 CEW89_15270 CEW89_15270 tpiA tpiA CEW89_02590 CEW89_02590 CEW89_02810 CEW89_02810 parC parC gpmI gpmI CEW89_14280 CEW89_14280 CEW89_14695 CEW89_14695 pgi pgi GCA_001550095_02232 GCA_001550095_02232 CEW89_16320 CEW89_16320 CEW89_16230 CEW89_16230 CEW89_16210 CEW89_16210 CEW89_16055 CEW89_16055 deoB deoB CEW89_18490 CEW89_18490 CEW89_18705 CEW89_18705 CEW89_18950 CEW89_18950 GCA_001550095_02630 GCA_001550095_02630 xylA xylA CEW89_04725 CEW89_04725 CEW89_04100 CEW89_04100 gyrA gyrA CEW89_03420 CEW89_03420 CEW89_15550 CEW89_15550 topA topA purE purE mce mce CEW89_06275 CEW89_06275 CEW89_06280 CEW89_06280 tig tig CEW89_10095 CEW89_10095 CEW89_10030 CEW89_10030 CEW89_00640 CEW89_00640 CEW89_00605 CEW89_00605 CEW89_11495 CEW89_11495 CEW89_11455 CEW89_11455 CEW89_11335 CEW89_11335 CEW89_11305 CEW89_11305 CEW89_10910 CEW89_10910 CEW89_10885 CEW89_10885 CEW89_10315 CEW89_10315 gyrB gyrB CEW89_13370 CEW89_13370 CEW89_13435 CEW89_13435 dapF dapF rfbC rfbC CEW89_12585 CEW89_12585 galE-2 galE-2 CEW89_12690 CEW89_12690 galE galE CEW89_05000 CEW89_05000 groL groL CEW89_09220 CEW89_09220 hisA hisA CEW89_19580 CEW89_19580 parE parE CEW89_19225 CEW89_19225 CEW89_17525 CEW89_17525
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CEW89_11815Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (215 aa)
queAUnannotated protein; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). (353 aa)
murIUnannotated protein; Provides the (R)-glutamate required for cell wall biosynthesis. (270 aa)
alrUnannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (346 aa)
glmMUnannotated protein; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. (448 aa)
rpiAUnannotated protein; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. (261 aa)
rpiBUnannotated protein. (149 aa)
truBUnannotated protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (302 aa)
truAUnannotated protein; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (222 aa)
trpFUnannotated protein; Belongs to the TrpF family. (213 aa)
CEW89_16785Unannotated protein. (142 aa)
CEW89_16765Unannotated protein; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. (169 aa)
CEW89_01195Unannotated protein. (617 aa)
CEW89_01135Unannotated protein. (726 aa)
CEW89_15270Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (349 aa)
tpiAUnannotated protein; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (248 aa)
CEW89_02590Unannotated protein. (458 aa)
CEW89_02810Unannotated protein. (428 aa)
parCUnannotated protein; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily. (786 aa)
gpmIUnannotated protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (508 aa)
CEW89_14280Unannotated protein. (629 aa)
CEW89_14695Unannotated protein. (212 aa)
pgiUnannotated protein; Belongs to the GPI family. (540 aa)
GCA_001550095_02232Unannotated protein. (1469 aa)
CEW89_16320Unannotated protein; Belongs to the ribulose-phosphate 3-epimerase family. (232 aa)
CEW89_16230Unannotated protein. (914 aa)
CEW89_16210Unannotated protein; Belongs to the hyi family. (254 aa)
CEW89_16055Unannotated protein. (98 aa)
deoBUnannotated protein; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. (403 aa)
CEW89_18490Unannotated protein. (735 aa)
CEW89_18705Unannotated protein. (351 aa)
CEW89_18950Unannotated protein; Belongs to the pseudouridine synthase RsuA family. (471 aa)
GCA_001550095_02630Unannotated protein. (544 aa)
xylAUnannotated protein; Belongs to the xylose isomerase family. (434 aa)
CEW89_04725Unannotated protein. (228 aa)
CEW89_04100Unannotated protein. (111 aa)
gyrAUnannotated protein; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (918 aa)
CEW89_03420Unannotated protein; Belongs to the pseudouridine synthase RsuA family. (193 aa)
CEW89_15550Unannotated protein. (162 aa)
topAUnannotated protein; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (896 aa)
purEUnannotated protein; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (161 aa)
mceUnannotated protein. (134 aa)
CEW89_06275Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (185 aa)
CEW89_06280Unannotated protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (168 aa)
tigUnannotated protein; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. (442 aa)
CEW89_10095Unannotated protein. (182 aa)
CEW89_10030Unannotated protein. (664 aa)
CEW89_00640Unannotated protein. (543 aa)
CEW89_00605Unannotated protein. (221 aa)
CEW89_11495Unannotated protein. (460 aa)
CEW89_11455Unannotated protein; Belongs to the 4-oxalocrotonate tautomerase family. (63 aa)
CEW89_11335Unannotated protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (387 aa)
CEW89_11305Unannotated protein. (206 aa)
CEW89_10910Unannotated protein. (322 aa)
CEW89_10885Unannotated protein. (114 aa)
CEW89_10315Unannotated protein. (331 aa)
gyrBUnannotated protein; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (811 aa)
CEW89_13370Unannotated protein. (386 aa)
CEW89_13435Unannotated protein; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (384 aa)
dapFUnannotated protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (278 aa)
rfbCUnannotated protein; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (186 aa)
CEW89_12585Unannotated protein; Belongs to the SIS family. GutQ/KpsF subfamily. (320 aa)
galE-2Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (328 aa)
CEW89_12690Unannotated protein. (280 aa)
galEUnannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (338 aa)
CEW89_05000Unannotated protein. (354 aa)
groLUnannotated protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (547 aa)
CEW89_09220Unannotated protein. (203 aa)
hisAUnannotated protein. (240 aa)
CEW89_19580Unannotated protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (309 aa)
parEUnannotated protein; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily. (651 aa)
CEW89_19225Unannotated protein. (707 aa)
CEW89_17525Unannotated protein. (105 aa)
Your Current Organism:
Celeribacter ethanolicus
NCBI taxonomy Id: 1758178
Other names: C. ethanolicus, CGMCC 1.15406, Celeribacter ethanolicus Jian et al. 2016, Celeribacter sp. NH195, JCM 31095, strain NH195
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