STRINGSTRING
SGUI_0035 SGUI_0035 SGUI_0233 SGUI_0233 SGUI_0434 SGUI_0434 SGUI_0523 SGUI_0523 SGUI_0760 SGUI_0760 SGUI_0789 SGUI_0789 SGUI_0910 SGUI_0910 pnp pnp SGUI_1149 SGUI_1149 SGUI_1843 SGUI_1843 SGUI_3016 SGUI_3016
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SGUI_0035Cytoplasmic axial filament protein CafA and Ribonuclease G. (924 aa)
SGUI_0233SSU ribosomal protein S1p. (486 aa)
SGUI_0434Putative peptidyl-prolyl cis-trans isomerase B (PPIase B) (Rotamase B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (232 aa)
SGUI_0523Ribonuclease D. (416 aa)
SGUI_0760ATP-dependent RNA helicase. (505 aa)
SGUI_0789ATP-dependent RNA helicase. (766 aa)
SGUI_0910ATP-dependent helicase hrpA. (1346 aa)
pnpPolyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (827 aa)
SGUI_1149Ribosomal large subunit pseudouridine synthase A. (288 aa)
SGUI_1843Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (172 aa)
SGUI_3016Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (496 aa)
Your Current Organism:
Serinicoccus sp. JLT9
NCBI taxonomy Id: 1758689
Other names: S. sp. JLT9
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