(23 nodes) Caprolactam degradation network (Sphingopyxis sp. HIX)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KTE33739.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
	KTE33477.1	enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
	KTE33243.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)
	KTE31702.1	enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (255 aa)
	KTE29757.1	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
	KTE30060.1	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)
	KTE46576.1	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)
	KTE46577.1	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)
	KTE44937.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
	KTE44949.1	Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
	KTE44256.1	Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
	KTE43638.1	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (256 aa)
	KTE43007.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
	KTE43011.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)
	KTE43013.1	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)
	KTE43015.1	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
	KTE41112.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
	KTE40385.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
	KTE39526.1	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
	KTE39527.1	Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
	KTE37807.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)
	KTE37323.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (100 aa)
	KTE34314.1	Thiamine biosynthesis protein ThiJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)

Your Current Organism:

Sphingopyxis sp. HIX

NCBI taxonomy Id: 1759074
Other names: S. sp. HIX

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KTE29757.1	KTE31702.1	ATE62_20820	ATE62_19475	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.	0.717
KTE29757.1	KTE33243.1	ATE62_20820	ATE62_17095	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.748
KTE29757.1	KTE33477.1	ATE62_20820	ATE62_16875	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.733
KTE29757.1	KTE33739.1	ATE62_20820	ATE62_16620	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.523
KTE29757.1	KTE39526.1	ATE62_20820	ATE62_08960	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.748
KTE29757.1	KTE40385.1	ATE62_20820	ATE62_07695	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.731
KTE29757.1	KTE43013.1	ATE62_20820	ATE62_04670	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.693
KTE29757.1	KTE43015.1	ATE62_20820	ATE62_04680	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.498
KTE29757.1	KTE43638.1	ATE62_20820	ATE62_04185	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.	0.699
KTE29757.1	KTE44937.1	ATE62_20820	ATE62_02400	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.711
KTE29757.1	KTE46576.1	ATE62_20820	ATE62_01135	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.	0.704
KTE29757.1	KTE46577.1	ATE62_20820	ATE62_01140	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.837
KTE30060.1	KTE41112.1	ATE62_20710	ATE62_06665	AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.588
KTE31702.1	KTE29757.1	ATE62_19475	ATE62_20820	enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.717
KTE31702.1	KTE33243.1	ATE62_19475	ATE62_17095	enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.748
KTE31702.1	KTE33477.1	ATE62_19475	ATE62_16875	enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.	enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.501
KTE31702.1	KTE33739.1	ATE62_19475	ATE62_16620	enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.688
KTE31702.1	KTE39526.1	ATE62_19475	ATE62_08960	enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.	acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.748
KTE31702.1	KTE40385.1	ATE62_19475	ATE62_07695	enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.597
KTE31702.1	KTE43015.1	ATE62_19475	ATE62_04680	enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.	enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.678