STRINGSTRING
clpA clpA KTE30421.1 KTE30421.1 ATE62_22065 ATE62_22065 KTE27611.1 KTE27611.1 KTE45622.1 KTE45622.1 KTE45624.1 KTE45624.1 KTE45778.1 KTE45778.1 secY secY secA secA KTE42356.1 KTE42356.1 ftsY ftsY ffh ffh KTE41415.1 KTE41415.1 KTE41416.1 KTE41416.1 KTE41417.1 KTE41417.1 KTE41418.1 KTE41418.1 KTE41419.1 KTE41419.1 KTE41420.1 KTE41420.1 KTE41421.1 KTE41421.1 KTE41422.1 KTE41422.1 KTE41088.1 KTE41088.1 KTE39798.1 KTE39798.1 KTE23696.1 KTE23696.1 KTE39553.1 KTE39553.1 KTE39554.1 KTE39554.1 KTE39259.1 KTE39259.1 KTE39057.1 KTE39057.1 yidC yidC secB secB KTE38209.1 KTE38209.1 secF secF secD secD yajC yajC KTE37768.1 KTE37768.1 KTE37813.1 KTE37813.1 KTE37791.1 KTE37791.1 clpB clpB secE secE KTE34905.1 KTE34905.1 KTE34915.1 KTE34915.1 KTE34617.1 KTE34617.1 KTE34618.1 KTE34618.1 KTE33278.1 KTE33278.1 KTE32395.1 KTE32395.1 KTE31901.1 KTE31901.1 KTE31769.1 KTE31769.1 KTE31770.1 KTE31770.1 KTE31771.1 KTE31771.1 KTE31804.1 KTE31804.1 KTE31805.1 KTE31805.1 KTE31772.1 KTE31772.1 KTE31806.1 KTE31806.1 KTE31773.1 KTE31773.1 KTE31774.1 KTE31774.1 KTE31775.1 KTE31775.1 KTE31776.1 KTE31776.1 KTE31778.1 KTE31778.1 KTE31491.1 KTE31491.1 tatA tatA tatB tatB tatC tatC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
clpAATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family. (778 aa)
KTE30421.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa)
ATE62_22065Hemin transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (550 aa)
KTE27611.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (670 aa)
KTE45622.1Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
KTE45624.1Conjugal transfer protein TraG; Type IV secretion VirD4 coupling protein family; Derived by automated computational analysis using gene prediction method: Protein Homology. (661 aa)
KTE45778.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa)
secYPreprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (457 aa)
secAPreprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. (911 aa)
KTE42356.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
ftsYSignal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components. (308 aa)
ffhRNA-binding protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components; Belongs to t [...] (490 aa)
KTE41415.1Type VI secretion protein; Part of the Type IV secretion system. Belongs to the GSP E family. (333 aa)
KTE41416.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
KTE41417.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
KTE41418.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)
KTE41419.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
KTE41420.1Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (790 aa)
KTE41421.1Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa)
KTE41422.1Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa)
KTE41088.1Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
KTE39798.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
KTE23696.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (573 aa)
KTE39553.1Conjugal transfer protein TrbC; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
KTE39554.1Conjugal transfer protein TraN; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
KTE39259.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family. (553 aa)
KTE39057.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (496 aa)
yidCPreprotein translocase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. (590 aa)
secBPreprotein translocase subunit SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. (171 aa)
KTE38209.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa)
secFPreprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (326 aa)
secDPreprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (536 aa)
yajCPreprotein translocase subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions. (110 aa)
KTE37768.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (523 aa)
KTE37813.1Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
KTE37791.1Conjugal transfer protein TraG; Type IV secretion VirD4 coupling protein family; Derived by automated computational analysis using gene prediction method: Protein Homology. (664 aa)
clpBATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (859 aa)
secEPreprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (65 aa)
KTE34905.1Lytic murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (581 aa)
KTE34915.1Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (147 aa)
KTE34617.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (173 aa)
KTE34618.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
KTE33278.1Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (675 aa)
KTE32395.1Conjugal transfer protein TraD; Derived by automated computational analysis using gene prediction method: Protein Homology. (664 aa)
KTE31901.1Septum formation initiator; Derived by automated computational analysis using gene prediction method: Protein Homology. (111 aa)
KTE31769.1Type II secretion system protein C; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
KTE31770.1Type II secretion system protein GspD; Derived by automated computational analysis using gene prediction method: Protein Homology. (734 aa)
KTE31771.1Type II secretion system protein GspE; Derived by automated computational analysis using gene prediction method: Protein Homology. (497 aa)
KTE31804.1Type II secretion system protein GspF; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
KTE31805.1Type II secretion system protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
KTE31772.1Type II secretion system protein GspH; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)
KTE31806.1Type II secretion system protein GspI; Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa)
KTE31773.1Type II secretion system protein GspJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (192 aa)
KTE31774.1General secretion pathway protein GspK; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
KTE31775.1General secretion pathway protein GspL; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)
KTE31776.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
KTE31778.1Peptidase A24; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (256 aa)
KTE31491.1Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)
tatAPreprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (76 aa)
tatBPreprotein translocase subunit TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. (127 aa)
tatCMttB family protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (269 aa)
Your Current Organism:
Sphingopyxis sp. HIX
NCBI taxonomy Id: 1759074
Other names: S. sp. HIX
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