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ccmC ccmC Atu2792 Atu2792 cobG cobG Atu3541 Atu3541 Atu4027 Atu4027 Atu4357 Atu4357 cy2 cy2 norB norB norC norC napC napC katA katA Atu1757 Atu1757 msrQ msrQ cyc cyc fixN fixN fixO fixO fixP fixP cysI cysI Atu1256 Atu1256 cycK cycK cycJ cycJ Atu0882 Atu0882 coxA coxA Atu0881 Atu0881 apaG apaG Atu0252 Atu0252 Atu0250 Atu0250 cyoB cyoB cycM cycM fbcC fbcC Atu2314 Atu2314 Atu2380 Atu2380 Atu2449 Atu2449 sdhD sdhD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ccmCABC transporter, membrane spanning protein (heme); Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family. (253 aa)
Atu2792Conserved hypothetical protein. (377 aa)
cobGCobalamin biosynthesis associated protein. (451 aa)
Atu3541Conserved hypothetical protein. (200 aa)
Atu4027Cytochrome c2. (166 aa)
Atu4357Conserved hypothetical protein. (221 aa)
cy2Cytochrome c2. (131 aa)
norBNitric oxide reductase, cytochrome b subunit. (448 aa)
norCNitric oxide reductase, cytochrome c-containing subunit. (150 aa)
napCPeriplasmic nitrate reductase, cytochrome c-type protein. (233 aa)
katACatalase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (723 aa)
Atu1757Conserved hypothetical protein. (202 aa)
msrQConserved hypothetical protein; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, [...] (215 aa)
cycCytochrome P450. (464 aa)
fixNCytochrome-c oxidase, FixN chain; Belongs to the heme-copper respiratory oxidase family. (540 aa)
fixOCytochrome C oxidase, FixO chain. (243 aa)
fixPCytochrome-c oxidase, FixP chain; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (287 aa)
cysISulfite reductase (NADPH) hemoprotein beta-component. (556 aa)
Atu1256Cytochrome P450 hydroxylase. (415 aa)
cycKCytochrome c-type synthesis protein. (663 aa)
cycJCytochrome-c biosynthesis heme-carrier protein cycJ; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family. (165 aa)
Atu0882Conserved hypothetical protein. (306 aa)
coxACytochrome-c oxidase chain I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (569 aa)
Atu0881Cytochrome C-556; Low-spin monoheme cytochrome c. (135 aa)
apaGapaG protein. (130 aa)
Atu0252Conserved hypothetical protein. (171 aa)
Atu0250Conserved hypothetical protein. (135 aa)
cyoBCytochrome O ubiquinol oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (667 aa)
cycMCytochrome c; May be involved in electron transfer from bc1 complex to aa3. (192 aa)
fbcCCytochrome c1. (294 aa)
Atu2314Conserved hypothetical protein. (420 aa)
Atu2380Conserved hypothetical protein. (133 aa)
Atu2449Conserved hypothetical protein. (177 aa)
sdhDSuccinate dehydrogenase hydrophobic membrane anchor. (126 aa)
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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