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gcvT gcvT soxA-2 soxA-2 soxA soxA soxA-3 soxA-3 Atu1632 Atu1632 gcvT-3 gcvT-3 gcvT-2 gcvT-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gcvTGlycine cleavage system T protein, aminomethyltransferase; Belongs to the GcvT family. (282 aa)
soxA-2Sarcosine oxidase alpha subunit. (987 aa)
soxASarcosine oxidase alpha subunit. (986 aa)
soxA-3Sarcosine oxidase alpha subunit. (996 aa)
Atu1632Dimethylglycine dehydrogenase; Belongs to the GcvT family. (837 aa)
gcvT-3Glycine cleavage system T protein, aminomethyltransferase. (357 aa)
gcvT-2Glycine cleavage system T protein, aminomethyltransferase; Belongs to the GcvT family. (471 aa)
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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