STRINGSTRING
chvE chvE Atu0036 Atu0036 Atu0157 Atu0157 gshB gshB rpsT rpsT Atu0463 Atu0463 Atu0484 Atu0484 aglE aglE aglG aglG glcF glcF betI betI oxyR oxyR Atu0985 Atu0985 Atu0986 Atu0986 Atu0987 Atu0987 divK divK Atu1667 Atu1667 Atu1879 Atu1879 trxB trxB Atu2186 Atu2186 Atu2187 Atu2187 gguB gguB gbpR gbpR Atu2384 Atu2384 Atu2422 Atu2422 malE malE Atu2708 Atu2708 exuR exuR Atu3253 Atu3253 Atu3368 Atu3368 lrp-3 lrp-3 gshB-2 gshB-2 oxyR-2 oxyR-2 Atu4669 Atu4669 Atu4670 Atu4670 Atu4678 Atu4678 drrA drrA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
chvESugar binding protein; Required for effective transcriptional induction of the vir genes by monosaccharides in response to plant signals and for normal growth and chemotaxis towards certain sugars. Functions as a periplasmic multiple sugar-binding receptor protein. It does not interact with a transport system. (354 aa)
Atu0036Conserved hypothetical protein. (144 aa)
Atu0157ABC transporter, substrate binding protein. (333 aa)
gshBGlutathione synthetase. (319 aa)
rpsT30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (88 aa)
Atu0463Hypothetical protein. (105 aa)
Atu0484Two component response regulator. (216 aa)
aglEABC transporter, substrate binding protein (alpha-glucoside). (453 aa)
aglGABC transporter, membrane spanning protein. (386 aa)
glcFGlycolate oxidase iron-sulfur subunit. (433 aa)
betITranscriptional regulator BetI; Repressor involved in the biosynthesis of the osmoprotectant glycine betaine. It represses transcription of the choline transporter BetT and the genes of BetAB involved in the synthesis of glycine betaine (By similarity). (206 aa)
oxyRTranscriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (295 aa)
Atu0985Permease. (311 aa)
Atu0986Hypothetical protein. (62 aa)
Atu0987DNA polymerase. (296 aa)
divKTwo component response regulator. (123 aa)
Atu1667Conserved hypothetical protein. (77 aa)
Atu1879ABC transporter, substrate binding protein (amino acid); Belongs to the bacterial solute-binding protein 3 family. (257 aa)
trxBThioredoxin reductase. (324 aa)
Atu2186Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (300 aa)
Atu2187Transcriptional regulator, ArsR family. (96 aa)
gguBABC transporter, membrane spanning protein (sugar); Belongs to the binding-protein-dependent transport system permease family. (398 aa)
gbpRTranscriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (304 aa)
Atu2384Transcriptional regulator, TetR family. (213 aa)
Atu2422ABC transporter, substrate binding protein (amino acid). (372 aa)
malEABC transporter, substrate binding protein (maltose). (410 aa)
Atu2708MFS permease. (425 aa)
exuRTranscriptional regulator, GntR family. (238 aa)
Atu3253ABC transporter, substrate binding protein. (324 aa)
Atu3368Periplasmic mannitol-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (365 aa)
lrp-3Transcriptional regulator, AsnC family. (152 aa)
gshB-2Glutathione synthetase; Belongs to the prokaryotic GSH synthase family. (348 aa)
oxyR-2Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (302 aa)
Atu4669Hypothetical protein. (155 aa)
Atu4670Hypothetical protein. (80 aa)
Atu4678ABC transporter, substrate binding protein (amino acid). (268 aa)
drrATwo component response regulator. (248 aa)
Your Current Organism:
Agrobacterium fabrum
NCBI taxonomy Id: 176299
Other names: A. fabrum str. C58, Agrobacterium fabrum str. C58, Agrobacterium tumefaciens (strain C58 / ATCC 33970), Agrobacterium tumefaciens (strain C58), Agrobacterium tumefaciens str. C58, Agrobacterium tumefaciens str. C58 (Cereon), Agrobacterium tumefaciens str. C58 (Dupont), Agrobacterium tumefaciens str. C58 (U. Washington), Rhizobium radiobacter str. C58 (Cereon), Rhizobium radiobacter str. C58 (Dupont), Rhizobium radiobacter str. C58 (U. Washington)
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