STRINGSTRING
KUF15022.1 KUF15022.1 KUF13758.1 KUF13758.1 KUF13763.1 KUF13763.1 KUF13841.1 KUF13841.1 KUF13859.1 KUF13859.1 rpsA rpsA KUF13935.1 KUF13935.1 KUF13949.1 KUF13949.1 KUF14025.1 KUF14025.1 rpmI rpmI rplT rplT pdxS pdxS KUF14127.1 KUF14127.1 KUF14135.1 KUF14135.1 priA-2 priA-2 KUF14189.1 KUF14189.1 KUF19509.1 KUF19509.1 rplY rplY KUF19570.1 KUF19570.1 KUF19920.1 KUF19920.1 KUF19650.1 KUF19650.1 KUF19652.1 KUF19652.1 KUF19728.1 KUF19728.1 KUF19768.1 KUF19768.1 KUF19787.1 KUF19787.1 dtd dtd KUF18687.1 KUF18687.1 KUF18691.1 KUF18691.1 KUF19041.1 KUF19041.1 KUF18728.1 KUF18728.1 KUF18804.1 KUF18804.1 KUF18830.1 KUF18830.1 KUF18977.1 KUF18977.1 KUF19005.1 KUF19005.1 cobB-2 cobB-2 KUF17502.1 KUF17502.1 AT728_08760 AT728_08760 KUF17565.1 KUF17565.1 nuoN nuoN KUF17599.1 KUF17599.1 KUF17620.1 KUF17620.1 nuoN-2 nuoN-2 rpmG rpmG rplJ rplJ rplL rplL rpsG rpsG rpsJ rpsJ rplC rplC rplW rplW rplB rplB rpsS rpsS rpsC rpsC rpmC rpmC rpsQ rpsQ rplN rplN rplX rplX rplE rplE rpsN rpsN rpsH rpsH rplR rplR rpsE rpsE rpmD rpmD rplO rplO rpmJ rpmJ rpsK rpsK rplQ rplQ rplM rplM rpsI rpsI KUF17732.1 KUF17732.1 KUF17797.1 KUF17797.1 KUF17831.1 KUF17831.1 KUF17851.1 KUF17851.1 KUF16419.1 KUF16419.1 KUF16472.1 KUF16472.1 KUF16485.1 KUF16485.1 KUF16661.1 KUF16661.1 KUF16662.1 KUF16662.1 KUF16569.1 KUF16569.1 KUF16574.1 KUF16574.1 KUF15680.1 KUF15680.1 KUF15945.1 KUF15945.1 KUF15777.1 KUF15777.1 rpsR rpsR rpsF rpsF KUF15799.1 KUF15799.1 KUF15800.1 KUF15800.1 rpmH rpmH recF recF gyrB gyrB KUF15847.1 KUF15847.1 KUF15885.1 KUF15885.1 AT728_14755 AT728_14755 KUF17202.1 KUF17202.1 KUF17321.1 KUF17321.1 KUF17322.1 KUF17322.1 KUF17391.1 KUF17391.1 KUF16052.1 KUF16052.1 KUF16053.1 KUF16053.1 KUF16301.1 KUF16301.1 KUF16072.1 KUF16072.1 rpmE rpmE KUF16110.1 KUF16110.1 KUF16149.1 KUF16149.1 KUF16179.1 KUF16179.1 KUF16197.1 KUF16197.1 KUF16198.1 KUF16198.1 KUF16230.1 KUF16230.1 KUF16281.1 KUF16281.1 KUF18364.1 KUF18364.1 KUF18604.1 KUF18604.1 KUF18382.1 KUF18382.1 KUF18427.1 KUF18427.1 AT728_19515 AT728_19515 rpsB rpsB rpsP rpsP rpmF rpmF rpmB rpmB KUF18584.1 KUF18584.1 KUF18007.1 KUF18007.1 KUF18011.1 KUF18011.1 KUF18020.1 KUF18020.1 AT728_20770 AT728_20770 KUF18083.1 KUF18083.1 KUF19140.1 KUF19140.1 KUF19213.1 KUF19213.1 KUF16707.1 KUF16707.1 KUF16724.1 KUF16724.1 KUF16802.1 KUF16802.1 KUF16859.1 KUF16859.1 KUF17009.1 KUF17009.1 KUF17101.1 KUF17101.1 KUF18183.1 KUF18183.1 KUF18184.1 KUF18184.1 KUF18200.1 KUF18200.1 KUF18228.1 KUF18228.1 KUF18288.1 KUF18288.1 KUF15450.1 KUF15450.1 KUF15455.1 KUF15455.1 nth nth AT728_25780 AT728_25780 KUF15603.1 KUF15603.1 topA topA KUF15516.1 KUF15516.1 rpsN-2 rpsN-2 rpmB-2 rpmB-2 rpmG-2 rpmG-2 rpmE2 rpmE2 rpsR-2 rpsR-2 KUF15562.1 KUF15562.1 KUF15575.1 KUF15575.1 KUF15580.1 KUF15580.1 KUF15051.1 KUF15051.1 KUF15052.1 KUF15052.1 KUF15160.1 KUF15160.1 KUF20017.1 KUF20017.1 KUF20047.1 KUF20047.1 KUF20061.1 KUF20061.1 KUF14579.1 KUF14579.1 KUF14709.1 KUF14709.1 KUF14674.1 KUF14674.1 KUF14691.1 KUF14691.1 KUF15371.1 KUF15371.1 KUF15410.1 KUF15410.1 KUF15419.1 KUF15419.1 KUF19305.1 KUF19305.1 dnaG dnaG recO recO rpsT rpsT obgE obgE rplU rplU KUF14552.1 KUF14552.1 KUF14465.1 KUF14465.1 KUF14474.1 KUF14474.1 gvpA gvpA KUF14481.1 KUF14481.1 KUF14485.1 KUF14485.1 KUF14486.1 KUF14486.1 KUF14487.1 KUF14487.1 KUF14488.1 KUF14488.1 KUF14508.1 KUF14508.1 KUF14564.1 KUF14564.1 KUF13436.1 KUF13436.1 KUF13441.1 KUF13441.1 KUF13544.1 KUF13544.1 recR recR KUF13336.1 KUF13336.1 KUF13346.1 KUF13346.1 kynU kynU KUF13382.1 KUF13382.1 KUF13122.1 KUF13122.1 KUF13129.1 KUF13129.1 KUF13133.1 KUF13133.1 KUF13568.1 KUF13568.1 AT728_34555 AT728_34555 KUF13606.1 KUF13606.1 KUF14804.1 KUF14804.1 KUF14362.1 KUF14362.1 KUF14384.1 KUF14384.1 KUF14417.1 KUF14417.1 KUF14852.1 KUF14852.1 KUF14872.1 KUF14872.1 KUF14883.1 KUF14883.1 KUF14886.1 KUF14886.1 KUF13027.1 KUF13027.1 KUF13052.1 KUF13052.1 KUF12948.1 KUF12948.1 KUF12964.1 KUF12964.1 KUF13282.1 KUF13282.1 KUF13277.1 KUF13277.1 KUF15269.1 KUF15269.1 KUF15237.1 KUF15237.1 KUF15259.1 KUF15259.1 KUF13708.1 KUF13708.1 hpf hpf rpsO rpsO KUF15984.1 KUF15984.1 KUF20466.1 KUF20466.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KUF15022.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1059 aa)
KUF13758.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (73 aa)
KUF13763.1Fuculose phosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
KUF13841.1FeS-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (139 aa)
KUF13859.1Uridine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
rpsA30S ribosomal protein S1; In Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; Derived by automated computational analysis using gene prediction method: Protein Homology. (504 aa)
KUF13935.1ATP-dependent protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
KUF13949.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (246 aa)
KUF14025.1RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (936 aa)
rpmI50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family. (64 aa)
rplT50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (127 aa)
pdxSPyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. (307 aa)
KUF14127.1DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)
KUF14135.1AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
priA-2Primosome assembly protein PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (717 aa)
KUF14189.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
KUF19509.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (500 aa)
rplY50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. (196 aa)
KUF19570.1Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
KUF19920.1Alpha-glucoside ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (439 aa)
KUF19650.1ADP-ribosylglycohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)
KUF19652.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (965 aa)
KUF19728.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (497 aa)
KUF19768.1Copper homeostasis protein CutC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CutC family. (230 aa)
KUF19787.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (423 aa)
dtdD-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (141 aa)
KUF18687.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (922 aa)
KUF18691.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (934 aa)
KUF19041.1ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)
KUF18728.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (897 aa)
KUF18804.1Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)
KUF18830.1DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology. (826 aa)
KUF18977.1Phytoene dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (518 aa)
KUF19005.1Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
cobB-2NAD-dependent protein deacetylase 1; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily. (296 aa)
KUF17502.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
AT728_08760Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)
KUF17565.1Type II secretion system protein E; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa)
nuoNNADH:ubiquinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (549 aa)
KUF17599.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
KUF17620.1NADH-quinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology. (592 aa)
nuoN-2NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (515 aa)
rpmG50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family. (54 aa)
rplJ50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (175 aa)
rplL50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (127 aa)
rpsG30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa)
rpsJ30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (102 aa)
rplC50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. (214 aa)
rplW50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. (138 aa)
rplB50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (278 aa)
rpsS30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (93 aa)
rpsC30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. (280 aa)
rpmC50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family. (74 aa)
rpsQ30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. (96 aa)
rplN50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa)
rplX50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. (107 aa)
rplE50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. (185 aa)
rpsN30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. (61 aa)
rpsH30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family. (132 aa)
rplR50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. (127 aa)
rpsE30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (201 aa)
rpmD50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology. (60 aa)
rplO50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (151 aa)
rpmJ50S ribosomal protein L36; Smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; Derived by automated computational analysis using gene prediction method: Protein Homology. (37 aa)
rpsK30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. (134 aa)
rplQ50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)
rplM50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. (147 aa)
rpsI30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. (171 aa)
KUF17732.1Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
KUF17797.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)
KUF17831.1N-acetylneuraminate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)
KUF17851.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (212 aa)
KUF16419.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (6158 aa)
KUF16472.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
KUF16485.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (481 aa)
KUF16661.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
KUF16662.1Tat pathway signal sequence domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
KUF16569.1Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (482 aa)
KUF16574.1Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
KUF15680.1Fe-S cluster assembly protein HesB; Derived by automated computational analysis using gene prediction method: Protein Homology. (203 aa)
KUF15945.1AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
KUF15777.1Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (491 aa)
rpsR30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (78 aa)
rpsF30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (96 aa)
KUF15799.1Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family. (334 aa)
KUF15800.1Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
rpmH50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL34 family. (45 aa)
recFRecombinase RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (374 aa)
gyrBDNA topoisomerase IV subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (699 aa)
KUF15847.1Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (681 aa)
KUF15885.1Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (564 aa)
AT728_14755Integration host factor; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (93 aa)
KUF17202.12-aminoethylphosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)
KUF17321.1DNA replication protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
KUF17322.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
KUF17391.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (551 aa)
KUF16052.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)
KUF16053.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
KUF16301.1Ser or Arg-related nuclear matrix protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
KUF16072.1cob(I)yrinic acid a c-diamide adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Cob(I)alamin adenosyltransferase family. (199 aa)
rpmE50S ribosomal protein L31; Binds the 23S rRNA. (74 aa)
KUF16110.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
KUF16149.1Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa)
KUF16179.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SOS response-associated peptidase family. (271 aa)
KUF16197.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
KUF16198.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
KUF16230.1DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. (532 aa)
KUF16281.1Fibrillarin; Derived by automated computational analysis using gene prediction method: Protein Homology. (663 aa)
KUF18364.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
KUF18604.1Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (467 aa)
KUF18382.1Fatty acyl-AMP ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2728 aa)
KUF18427.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
AT728_19515Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
rpsB30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family. (305 aa)
rpsP30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family. (144 aa)
rpmF50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family. (57 aa)
rpmB50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. (61 aa)
KUF18584.1DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (237 aa)
KUF18007.1NAD-dependent deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
KUF18011.1Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)
KUF18020.1Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2423 aa)
AT728_20770HTH luxR-type domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (966 aa)
KUF18083.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (7065 aa)
KUF19140.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
KUF19213.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (93 aa)
KUF16707.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1047 aa)
KUF16724.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)
KUF16802.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (967 aa)
KUF16859.1Replicative DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)
KUF17009.1Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)
KUF17101.1Iron-sulfur protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
KUF18183.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (976 aa)
KUF18184.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (917 aa)
KUF18200.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (891 aa)
KUF18228.1FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)
KUF18288.1Class II aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
KUF15450.1Helicase DnaB; Derived by automated computational analysis using gene prediction method: Protein Homology. (511 aa)
KUF15455.1Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
nthEndonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (313 aa)
AT728_25780T2SSF domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
KUF15603.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)
topADNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (963 aa)
KUF15516.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (750 aa)
rpsN-230S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. (101 aa)
rpmB-250S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. (78 aa)
rpmG-250S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family. (54 aa)
rpmE250S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology. (82 aa)
rpsR-230S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (79 aa)
KUF15562.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
KUF15575.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa)
KUF15580.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (187 aa)
KUF15051.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (154 aa)
KUF15052.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
KUF15160.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (826 aa)
KUF20017.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)
KUF20047.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)
KUF20061.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)
KUF14579.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
KUF14709.1Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)
KUF14674.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa)
KUF14691.1Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)
KUF15371.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (526 aa)
KUF15410.1Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (693 aa)
KUF15419.1Phytoene dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (517 aa)
KUF19305.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (2183 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (635 aa)
recODNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (249 aa)
rpsT30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. (88 aa)
obgEGTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. (482 aa)
rplU50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (106 aa)
KUF14552.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)
KUF14465.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1684 aa)
KUF14474.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (652 aa)
gvpAGas vesicle synthesis-like protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure. (144 aa)
KUF14481.1Gas vesicle protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
KUF14485.1Gas vesicle protein GvpJ; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. (133 aa)
KUF14486.1Gas vesicle protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
KUF14487.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (86 aa)
KUF14488.1Gas vesicle protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (96 aa)
KUF14508.1ADP-ribosylglycohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
KUF14564.1AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)
KUF13436.1DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (572 aa)
KUF13441.1Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
KUF13544.1Iron sulfur protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
recRRecombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (199 aa)
KUF13336.1Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (104 aa)
KUF13346.1Adenylyl cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (192 aa)
kynUKynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (414 aa)
KUF13382.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)
KUF13122.1DNA topoisomerase IV subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. (707 aa)
KUF13129.1Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (743 aa)
KUF13133.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)
KUF13568.1Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)
AT728_34555Uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)
KUF13606.1Dodecin family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (71 aa)
KUF14804.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
KUF14362.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (882 aa)
KUF14384.1Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)
KUF14417.1Squalene--hopene cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (664 aa)
KUF14852.1Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
KUF14872.1FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (539 aa)
KUF14883.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1373 aa)
KUF14886.1DNA topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
KUF13027.1Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (446 aa)
KUF13052.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (834 aa)
KUF12948.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (956 aa)
KUF12964.1Uridine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
KUF13282.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)
KUF13277.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
KUF15269.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (175 aa)
KUF15237.1DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (837 aa)
KUF15259.1SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
KUF13708.1Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa)
hpfRibosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (230 aa)
rpsO30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (95 aa)
KUF15984.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
KUF20466.1AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
Your Current Organism:
Streptomyces silvensis
NCBI taxonomy Id: 1765722
Other names: S. silvensis
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