STRINGSTRING
APZ42055.1 APZ42055.1 BW247_03660 BW247_03660 APZ42309.1 APZ42309.1 murA murA APZ42468.1 APZ42468.1 APZ42828.1 APZ42828.1 APZ42833.1 APZ42833.1 APZ42908.1 APZ42908.1 APZ42909.1 APZ42909.1 APZ42910.1 APZ42910.1 APZ42911.1 APZ42911.1 BW247_07725 BW247_07725 APZ43076.1 APZ43076.1 APZ43080.1 APZ43080.1 APZ43226.1 APZ43226.1 APZ43227.1 APZ43227.1 APZ44646.1 APZ44646.1 APZ43469.1 APZ43469.1 APZ43521.1 APZ43521.1 APZ43522.1 APZ43522.1 APZ43531.1 APZ43531.1 APZ43532.1 APZ43532.1 APZ43970.1 APZ43970.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ42055.1UDP-glucose 6-dehydrogenase; Catalyzes the formation of UDP-glucuronate from UDP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
BW247_03660Transposase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (324 aa)
APZ42309.1Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family. (471 aa)
murAUDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (419 aa)
APZ42468.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (558 aa)
APZ42828.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)
APZ42833.1Undecaprenyl-phosphate glucose phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa)
APZ42908.1Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (290 aa)
APZ42909.1dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (182 aa)
APZ42910.1dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (291 aa)
APZ42911.1dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (353 aa)
BW247_07725Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (745 aa)
APZ43076.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
APZ43080.1Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)
APZ43226.1UDP-N-acetyl-D-glucosamine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
APZ43227.1Erythromycin biosynthesis sensory transduction protein eryC1; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family. (365 aa)
APZ44646.1UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
APZ43469.1dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (179 aa)
APZ43521.1UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
APZ43522.1UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (368 aa)
APZ43531.1Vi polysaccharide biosynthesis protein VipA/TviB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (425 aa)
APZ43532.1Capsular biosynthesis protein CpsI; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
APZ43970.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)
Your Current Organism:
Acidihalobacter ferrooxidans
NCBI taxonomy Id: 1765967
Other names: A. ferrooxidans
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