STRINGSTRING
APZ41831.1 APZ41831.1 APZ41846.1 APZ41846.1 APZ41937.1 APZ41937.1 APZ41938.1 APZ41938.1 APZ41974.1 APZ41974.1 APZ42020.1 APZ42020.1 APZ42021.1 APZ42021.1 APZ42022.1 APZ42022.1 APZ42049.1 APZ42049.1 lpxC lpxC APZ42181.1 APZ42181.1 bamE bamE lpxH lpxH APZ42651.1 APZ42651.1 APZ42652.1 APZ42652.1 APZ42653.1 APZ42653.1 APZ42655.1 APZ42655.1 lpxK lpxK APZ42657.1 APZ42657.1 kdsB kdsB APZ42659.1 APZ42659.1 APZ42660.1 APZ42660.1 APZ42756.1 APZ42756.1 APZ42842.1 APZ42842.1 APZ42843.1 APZ42843.1 bamD bamD bamB bamB APZ43077.1 APZ43077.1 rnhB rnhB lpxB lpxB lpxA lpxA fabZ fabZ lpxD lpxD APZ43231.1 APZ43231.1 bamA bamA APZ43247.1 APZ43247.1 APZ43248.1 APZ43248.1 kdsA kdsA pal pal tolB tolB APZ43378.1 APZ43378.1 tolQ tolQ APZ43380.1 APZ43380.1 APZ43512.1 APZ43512.1 lptE lptE lpxL lpxL APZ43902.1 APZ43902.1 APZ43931.1 APZ43931.1 APZ43932.1 APZ43932.1 APZ43933.1 APZ43933.1 APZ43934.1 APZ43934.1 APZ43935.1 APZ43935.1 lptD lptD surA surA APZ44126.1 APZ44126.1 APZ44353.1 APZ44353.1 APZ44414.1 APZ44414.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
APZ41831.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
APZ41846.1Hypothetical protein; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family. (334 aa)
APZ41937.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (141 aa)
APZ41938.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
APZ41974.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
APZ42020.1Flagellar motor protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
APZ42021.1Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)
APZ42022.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (284 aa)
APZ42049.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (242 aa)
lpxCUDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. (304 aa)
APZ42181.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (199 aa)
bamEHypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (111 aa)
lpxHUDP-2,3-diacylglucosamine diphosphatase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (243 aa)
APZ42651.1IS110 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
APZ42652.1Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
APZ42653.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)
APZ42655.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)
lpxKTetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). (329 aa)
APZ42657.1Tetraacyldisaccharide 4'-kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0434 family. (61 aa)
kdsB3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (253 aa)
APZ42659.1MOSC domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)
APZ42660.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
APZ42756.13-deoxy-D-manno-octulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. (418 aa)
APZ42842.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (116 aa)
APZ42843.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)
bamDHypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (250 aa)
bamBOuter membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (425 aa)
APZ43077.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
rnhBRibonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (203 aa)
lpxBlipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (392 aa)
lpxAacyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (257 aa)
fabZ3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (146 aa)
lpxDUDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. (355 aa)
APZ43231.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the skp family. (172 aa)
bamAOuter membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. (757 aa)
APZ43247.1LPS export ABC transporter permease LptG; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
APZ43248.1LPS export ABC transporter permease LptF; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
kdsA3-deoxy-8-phosphooctulonate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the KdsA family. (279 aa)
palTol-pal system protein YbgF; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (187 aa)
tolBTol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (435 aa)
APZ43378.1Protein TolR; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)
tolQProtein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (229 aa)
APZ43380.1Tol-pal system-associated acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)
APZ43512.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
lptEHypothetical protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family. (170 aa)
lpxLHypothetical protein; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A). (300 aa)
APZ43902.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (361 aa)
APZ43931.1D-arabinose 5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
APZ43932.1Hypothetical protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. (179 aa)
APZ43933.1LPS export ABC transporter periplasmic protein LptC; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa)
APZ43934.1Lipopolysaccharide transport periplasmic protein LptA; Derived by automated computational analysis using gene prediction method: Protein Homology. (174 aa)
APZ43935.1LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
lptDHypothetical protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. (719 aa)
surAHypothetical protein; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation. (436 aa)
APZ44126.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
APZ44353.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (292 aa)
APZ44414.1Lipid A biosynthesis acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
Your Current Organism:
Acidihalobacter ferrooxidans
NCBI taxonomy Id: 1765967
Other names: A. ferrooxidans
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