(14 nodes) Mixed, incl. Protein secretion, and CbbX, AAA lid domain network (Mycobacterium kansasii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ARG92958.1	ESX-1 secretion-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (103 aa)
	ARG92959.1	ESX secretion-associated protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)
	ARG92960.1	DUF2694 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)
	ARG92961.1	Type VII secretion AAA-ATPase EccA; Derived by automated computational analysis using gene prediction method: Protein Homology. (573 aa)
	ARG92962.1	Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)
	ARG92963.1	Type VII secretion protein EccCa; Derived by automated computational analysis using gene prediction method: Protein Homology. (745 aa)
	ARG92964.1	Type VII secretion protein EccCb; Derived by automated computational analysis using gene prediction method: Protein Homology. (590 aa)
	ARG92965.1	PE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (98 aa)
	ARG95802.1	PPE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
	esxB	WXG100 family type VII secretion target; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family. (100 aa)
	esat6	WXG100 family type VII secretion target; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family. (95 aa)
	ARG92968.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (815 aa)
	ARG92969.1	Type VII secretion integral membrane protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology. (511 aa)
	ARG92970.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)

Your Current Organism:

Mycobacterium kansasii

NCBI taxonomy Id: 1768
Other names: ATCC 12478, CIP 104589, DSM 44162, JCM 6379, M. kansasii, NCTC 13024

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARG92958.1	ARG92959.1	B1T50_14510	B1T50_14515	ESX-1 secretion-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ESX secretion-associated protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.845
ARG92958.1	ARG92960.1	B1T50_14510	B1T50_14520	ESX-1 secretion-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DUF2694 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.761
ARG92958.1	ARG92961.1	B1T50_14510	B1T50_14525	ESX-1 secretion-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type VII secretion AAA-ATPase EccA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.898
ARG92958.1	ARG92962.1	B1T50_14510	B1T50_14530	ESX-1 secretion-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.874
ARG92958.1	ARG92963.1	B1T50_14510	B1T50_14535	ESX-1 secretion-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type VII secretion protein EccCa; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.798
ARG92958.1	ARG92964.1	B1T50_14510	B1T50_14540	ESX-1 secretion-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type VII secretion protein EccCb; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.798
ARG92958.1	ARG92965.1	B1T50_14510	B1T50_14545	ESX-1 secretion-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	PE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.486
ARG92958.1	ARG92970.1	B1T50_14510	B1T50_14575	ESX-1 secretion-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.536
ARG92958.1	ARG95802.1	B1T50_14510	B1T50_14550	ESX-1 secretion-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	PPE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.580
ARG92958.1	esxB	B1T50_14510	B1T50_14555	ESX-1 secretion-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	WXG100 family type VII secretion target; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.	0.570
ARG92959.1	ARG92958.1	B1T50_14515	B1T50_14510	ESX secretion-associated protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology.	ESX-1 secretion-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.845
ARG92959.1	ARG92960.1	B1T50_14515	B1T50_14520	ESX secretion-associated protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology.	DUF2694 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.749
ARG92959.1	ARG92961.1	B1T50_14515	B1T50_14525	ESX secretion-associated protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type VII secretion AAA-ATPase EccA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.880
ARG92959.1	ARG92962.1	B1T50_14515	B1T50_14530	ESX secretion-associated protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.786
ARG92959.1	ARG92963.1	B1T50_14515	B1T50_14535	ESX secretion-associated protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type VII secretion protein EccCa; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.708
ARG92959.1	ARG92964.1	B1T50_14515	B1T50_14540	ESX secretion-associated protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type VII secretion protein EccCb; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.706
ARG92959.1	ARG92965.1	B1T50_14515	B1T50_14545	ESX secretion-associated protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology.	PE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.470
ARG92959.1	ARG92968.1	B1T50_14515	B1T50_14565	ESX secretion-associated protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.511
ARG92959.1	ARG95802.1	B1T50_14515	B1T50_14550	ESX secretion-associated protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology.	PPE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.858
ARG92959.1	esat6	B1T50_14515	B1T50_14560	ESX secretion-associated protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology.	WXG100 family type VII secretion target; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.	0.495