23 items (Erysipelotrichaceae bacterium MTC7)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	OCN05905.1	ATP/GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (587 aa)
	OCN05906.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)
	OCN05907.1	Antirestriction protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)
	OCN05908.1	Antirestriction protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (167 aa)
	OCN05910.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (73 aa)
	OCN05912.1	Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)
	OCN05913.1	Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. (464 aa)
	OCN05916.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
	OCN05917.1	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa)
	A4S06_10225	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (731 aa)
	OCN04809.1	Peptidase P60; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
	OCN04810.1	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
	OCN04688.1	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa)
	OCN04689.1	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)
	OCN04690.1	Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa)
	OCN04691.1	Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
	OCN04692.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (73 aa)
	OCN04693.1	Antirestriction protein ArdA; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
	OCN04694.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (168 aa)
	OCN04695.1	ATP/GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (815 aa)
	OCN04696.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (725 aa)
	OCN04697.1	Peptidase P60; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
	OCN04698.1	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)

Your Current Organism:

Erysipelotrichaceae bacterium MTC7

NCBI taxonomy Id: 1768196
Other names: E. bacterium MTC7

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A4S06_10225	OCN04688.1	A4S06_10225	A4S06_10745	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.735
A4S06_10225	OCN04689.1	A4S06_10225	A4S06_10750	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.690
A4S06_10225	OCN04690.1	A4S06_10225	A4S06_10755	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.779
A4S06_10225	OCN04691.1	A4S06_10225	A4S06_10760	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.760
A4S06_10225	OCN04692.1	A4S06_10225	A4S06_10765	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.796
A4S06_10225	OCN04693.1	A4S06_10225	A4S06_10770	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Antirestriction protein ArdA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
A4S06_10225	OCN04694.1	A4S06_10225	A4S06_10775	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
A4S06_10225	OCN04695.1	A4S06_10225	A4S06_10780	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	ATP/GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.793
A4S06_10225	OCN04697.1	A4S06_10225	A4S06_10790	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptidase P60; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.708
A4S06_10225	OCN04698.1	A4S06_10225	A4S06_10795	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.822
A4S06_10225	OCN04809.1	A4S06_10225	A4S06_10230	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Peptidase P60; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.948
A4S06_10225	OCN04810.1	A4S06_10225	A4S06_10235	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967
A4S06_10225	OCN05905.1	A4S06_10225	A4S06_06710	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	ATP/GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.804
A4S06_10225	OCN05906.1	A4S06_10225	A4S06_06715	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.789
A4S06_10225	OCN05907.1	A4S06_10225	A4S06_06720	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Antirestriction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.801
A4S06_10225	OCN05908.1	A4S06_10225	A4S06_06725	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Antirestriction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.788
A4S06_10225	OCN05910.1	A4S06_10225	A4S06_06735	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.796
A4S06_10225	OCN05912.1	A4S06_10225	A4S06_06745	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.783
A4S06_10225	OCN05913.1	A4S06_10225	A4S06_06750	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.788
A4S06_10225	OCN05916.1	A4S06_10225	A4S06_06765	ATP/GTP-binding protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776