(6 nodes) Mixed, incl. Bacterial PH domain, and 4Fe-4S dicluster domain network (Polaribacter vadi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AOW16602.1	1,4-dihydroxy-2-naphthoate prenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (171 aa)
	AOW16604.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (502 aa)
	AOW16605.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)
	AOW16606.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (193 aa)
	AOW16607.1	CoB--CoM heterodisulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
	AOW16608.1	Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)

Your Current Organism:

Polaribacter vadi

NCBI taxonomy Id: 1774273
Other names: JCM 31217, KACC 18704, P. vadi, Polaribacter sp. LPB0003, Polaribacter vadi Kim et al. 2017, strain LPB0003

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOW16602.1	AOW16604.1	LPB03_03565	LPB03_03575	1,4-dihydroxy-2-naphthoate prenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.647
AOW16602.1	AOW16605.1	LPB03_03565	LPB03_03580	1,4-dihydroxy-2-naphthoate prenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.647
AOW16602.1	AOW16606.1	LPB03_03565	LPB03_03585	1,4-dihydroxy-2-naphthoate prenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.607
AOW16602.1	AOW16607.1	LPB03_03565	LPB03_03590	1,4-dihydroxy-2-naphthoate prenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	CoB--CoM heterodisulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.608
AOW16604.1	AOW16602.1	LPB03_03575	LPB03_03565	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	1,4-dihydroxy-2-naphthoate prenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.647
AOW16604.1	AOW16605.1	LPB03_03575	LPB03_03580	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947
AOW16604.1	AOW16606.1	LPB03_03575	LPB03_03585	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.733
AOW16604.1	AOW16607.1	LPB03_03575	LPB03_03590	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CoB--CoM heterodisulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
AOW16604.1	AOW16608.1	LPB03_03575	LPB03_03595	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.445
AOW16605.1	AOW16602.1	LPB03_03580	LPB03_03565	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	1,4-dihydroxy-2-naphthoate prenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.647
AOW16605.1	AOW16604.1	LPB03_03580	LPB03_03575	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947
AOW16605.1	AOW16606.1	LPB03_03580	LPB03_03585	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.733
AOW16605.1	AOW16607.1	LPB03_03580	LPB03_03590	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	CoB--CoM heterodisulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
AOW16605.1	AOW16608.1	LPB03_03580	LPB03_03595	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.445
AOW16606.1	AOW16602.1	LPB03_03585	LPB03_03565	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	1,4-dihydroxy-2-naphthoate prenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.607
AOW16606.1	AOW16604.1	LPB03_03585	LPB03_03575	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.733
AOW16606.1	AOW16605.1	LPB03_03585	LPB03_03580	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.733
AOW16606.1	AOW16607.1	LPB03_03585	LPB03_03590	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	CoB--CoM heterodisulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
AOW16606.1	AOW16608.1	LPB03_03585	LPB03_03595	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.460
AOW16607.1	AOW16602.1	LPB03_03590	LPB03_03565	CoB--CoM heterodisulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	1,4-dihydroxy-2-naphthoate prenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.608