(30 nodes) Diguanylate cyclase, and HD-GYP domain network (Desulfobacterium autotrophicum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACN13201.1	Signal transduction family protein (GGDEF domain protein). (719 aa)
	ACN13295.1	Signal transduction family protein (GGDEF domain protein). (925 aa)
	ACN13365.1	Signal transduction family protein (GGDEF domain protein). (339 aa)
	ACN13389.1	Conserved hypothetical protein. (465 aa)
	ACN13472.1	Signal transduction family protein (GGDEF domain protein). (600 aa)
	ACN13589.1	Putative diguanylate cyclase (GGDEF domain protein). (354 aa)
	ACN13688.1	Signal transduction family protein (GGDEF domain protein). (559 aa)
	ACN14287.1	Two domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein). (440 aa)
	ACN14519.1	Signal transduction family protein (GGDEF domain protein). (381 aa)
	ACN14648.1	Signal transduction family protein (GGDEF domain protein). (338 aa)
	ACN14678.1	Signal transduction family protein (GGDEF domain protein). (629 aa)
	ACN14745.1	Metal dependent response regulator. (459 aa)
	ACN14850.1	Signal transduction family protein (GGDEF domain protein). (467 aa)
	ACN15189.1	Signal transduction family protein (GGDEF domain protein). (305 aa)
	ACN15321.1	Signal transduction family protein (GGDEF domain protein). (341 aa)
	ACN15800.1	Two-component response receiver and regulator protein. (516 aa)
	ACN15891.1	Signal transduction family protein (GGDEF domain protein). (470 aa)
	ACN16414.1	Two-component transcriptional regulatory protein. (368 aa)
	ACN16431.1	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic substrate binding component. (404 aa)
	ACN16502.1	Two-component response regulator fusion protein (N:response regulator receiver-C:HD-GAF domain protein). (360 aa)
	ACN16663.1	Putative reponse regulator (CheY and GGDEF domain family protein). (342 aa)
	ACN16797.1	Predicted two-component system transcriptional regulator. (498 aa)
	ACN16937.1	GGDEF domain family protein. (537 aa)
	ACN16970.1	HD-GYP hydrolase domain family protein. (304 aa)
	ACN16997.1	Two-component response regulator (GGDEF domain family protein). (137 aa)
	ACN17003.1	GGDEF domain family protein. (430 aa)
	ACN17248.1	Conserved hypothetical protein. (938 aa)
	ACN17412.1	Putative chemotaxis response regulator. (396 aa)
	ACN17548.1	Response regulator. (364 aa)
	ACN17978.1	GGDEF domain protein. (421 aa)

Your Current Organism:

Desulfobacterium autotrophicum

NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACN13201.1	ACN13295.1	HRM2_00780	HRM2_01730	Signal transduction family protein (GGDEF domain protein).	Signal transduction family protein (GGDEF domain protein).	0.649
ACN13201.1	ACN13365.1	HRM2_00780	HRM2_02430	Signal transduction family protein (GGDEF domain protein).	Signal transduction family protein (GGDEF domain protein).	0.877
ACN13201.1	ACN13389.1	HRM2_00780	HRM2_02670	Signal transduction family protein (GGDEF domain protein).	Conserved hypothetical protein.	0.595
ACN13201.1	ACN13472.1	HRM2_00780	HRM2_03520	Signal transduction family protein (GGDEF domain protein).	Signal transduction family protein (GGDEF domain protein).	0.859
ACN13201.1	ACN13589.1	HRM2_00780	HRM2_04750	Signal transduction family protein (GGDEF domain protein).	Putative diguanylate cyclase (GGDEF domain protein).	0.925
ACN13201.1	ACN13688.1	HRM2_00780	HRM2_05740	Signal transduction family protein (GGDEF domain protein).	Signal transduction family protein (GGDEF domain protein).	0.506
ACN13201.1	ACN14287.1	HRM2_00780	HRM2_11750	Signal transduction family protein (GGDEF domain protein).	Two domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein).	0.968
ACN13201.1	ACN14519.1	HRM2_00780	HRM2_14100	Signal transduction family protein (GGDEF domain protein).	Signal transduction family protein (GGDEF domain protein).	0.886
ACN13201.1	ACN14648.1	HRM2_00780	HRM2_15390	Signal transduction family protein (GGDEF domain protein).	Signal transduction family protein (GGDEF domain protein).	0.892
ACN13201.1	ACN14678.1	HRM2_00780	HRM2_15690	Signal transduction family protein (GGDEF domain protein).	Signal transduction family protein (GGDEF domain protein).	0.511
ACN13201.1	ACN14745.1	HRM2_00780	HRM2_16360	Signal transduction family protein (GGDEF domain protein).	Metal dependent response regulator.	0.406
ACN13201.1	ACN14850.1	HRM2_00780	HRM2_17460	Signal transduction family protein (GGDEF domain protein).	Signal transduction family protein (GGDEF domain protein).	0.909
ACN13201.1	ACN15189.1	HRM2_00780	HRM2_20910	Signal transduction family protein (GGDEF domain protein).	Signal transduction family protein (GGDEF domain protein).	0.859
ACN13201.1	ACN15321.1	HRM2_00780	HRM2_22230	Signal transduction family protein (GGDEF domain protein).	Signal transduction family protein (GGDEF domain protein).	0.954
ACN13201.1	ACN15800.1	HRM2_00780	HRM2_27080	Signal transduction family protein (GGDEF domain protein).	Two-component response receiver and regulator protein.	0.591
ACN13201.1	ACN15891.1	HRM2_00780	HRM2_28020	Signal transduction family protein (GGDEF domain protein).	Signal transduction family protein (GGDEF domain protein).	0.859
ACN13201.1	ACN16414.1	HRM2_00780	HRM2_33390	Signal transduction family protein (GGDEF domain protein).	Two-component transcriptional regulatory protein.	0.425
ACN13201.1	ACN16431.1	HRM2_00780	HRM2_33560	Signal transduction family protein (GGDEF domain protein).	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic substrate binding component.	0.873
ACN13201.1	ACN16663.1	HRM2_00780	HRM2_35980	Signal transduction family protein (GGDEF domain protein).	Putative reponse regulator (CheY and GGDEF domain family protein).	0.948
ACN13201.1	ACN16797.1	HRM2_00780	HRM2_37390	Signal transduction family protein (GGDEF domain protein).	Predicted two-component system transcriptional regulator.	0.674

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