STRINGSTRING
fhlA fhlA ACN15182.1 ACN15182.1 ACN15866.1 ACN15866.1 rpoN rpoN ACN16791.1 ACN16791.1 ACN16793.1 ACN16793.1 ACN16796.1 ACN16796.1 ACN16936.1 ACN16936.1 ACN17588.1 ACN17588.1 ntrC3 ntrC3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fhlAFhlA; Formate hydrogen-lyase transcriptional activator FhlA (Sigma-54 factor interaction region). (492 aa)
ACN15182.1Sigma-54 dependent two component DNA-binding response regulator (Fis family protein). (742 aa)
ACN15866.1Sigma-54 dependent two component DNA-binding response regulator (Fis family protein). (467 aa)
rpoNRpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (479 aa)
ACN16791.1Putative nitrogen assimilation regulatory protein NtrC. (455 aa)
ACN16793.1Sigma-54 dependent two-component transcriptional regulator. (353 aa)
ACN16796.1Hypothetical protein. (93 aa)
ACN16936.1Sigma-54 dependent sensory box histidine kinase/response regulator. (599 aa)
ACN17588.1Transcriptional regulator (PAS/PAC domain protein). (710 aa)
ntrC3NtrC3; Nitrogen assimilation regulatory protein NtrC. (466 aa)
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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