STRINGSTRING
hypC hypC hypF hypF hypD hypD hypE hypE hyaD1 hyaD1 hysA hysA hysB hysB hynB hynB hynA hynA hynC hynC hypB hypB hypA hypA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hypCHypC; Hydrogenase expression/formation protein HypC. (78 aa)
hypFHypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide. (733 aa)
hypDHypD; Hydrogenase expression/formation protein HypD; Belongs to the HypD family. (362 aa)
hypEHypE; Hydrogenase expression/formation protein HypE. (336 aa)
hyaD1HyaD1; Hydrogenase expression/formation protein HyaD1. (152 aa)
hysAHysA; Periplasmic [NiFeSe] hydrogenase, large subunit precursor HysA; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (504 aa)
hysBHysB; Periplasmic [NiFeSe] hydrogenase, small subunit precursor HysB. (337 aa)
hynBHynB; Periplasmic [NiFe] hydrogenase, small subunit HynB. (330 aa)
hynAHynA; Periplasmic [NiFe] hydrogenase, large subunit HynA; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (545 aa)
hynCHynC; [NiFe] hydrogenase, maturation factor HynC. (169 aa)
hypBHypB; Hydrogenase isoenzymes nickel incorporation protein HypB. (220 aa)
hypAHypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (115 aa)
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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