STRINGSTRING
dppA2 dppA2 dppA4 dppA4 dppA3 dppA3 hyfG hyfG hypA hypA hypB hypB dppE dppE ACN15828.1 ACN15828.1 hynA hynA appA appA mvhA mvhA hysA hysA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dppA2DppA2; ABC-type oliopeptide/dipeptide transporter, periplasmic binding protein DppA. (506 aa)
dppA4DppA4; ABC-type peptide transporter, periplasmic peptide-binding protein DppA. (517 aa)
dppA3DppA3; Periplasmic dipeptide transport protein DppA. (533 aa)
hyfGHyfG; Hydrogenase HyfG homolog, large subunit. (503 aa)
hypAHypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (115 aa)
hypBHypB; Hydrogenase isoenzymes nickel incorporation protein HypB. (220 aa)
dppEDppE; ABC-type dipeptide/oligopeptide/nickel transport system, periplasmic binding protein DppE. (628 aa)
ACN15828.1Conserved hypothetical protein; Belongs to the LarC family. (400 aa)
hynAHynA; Periplasmic [NiFe] hydrogenase, large subunit HynA; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (545 aa)
appAAppA; ABC-type oligopeptide transport system, substrate binding protein AppA. (514 aa)
mvhAMvhA; F420-non-reducing hydrogenase, iron-sulfur subunit mvhA. (449 aa)
hysAHysA; Periplasmic [NiFeSe] hydrogenase, large subunit precursor HysA; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (504 aa)
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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