STRINGSTRING
serC serC hisC2 hisC2 ACN13546.1 ACN13546.1 ACN14501.1 ACN14501.1 ACN14525.1 ACN14525.1 hisC1 hisC1 hemL hemL aspC3 aspC3 ACN16811.1 ACN16811.1 hisC3 hisC3 gabT gabT aspC4 aspC4 iscS2 iscS2 rocD2 rocD2 aspC1 aspC1 aspC5 aspC5 ACN17622.1 ACN17622.1 ACN13435.1 ACN13435.1 arnB arnB ltaE ltaE aspC2 aspC2 bioF bioF ACN13932.1 ACN13932.1 gcvP2 gcvP2 dapL dapL ACN13133.1 ACN13133.1 rocD1 rocD1 mdeA mdeA iscS1 iscS1 ACN16221.1 ACN16221.1 glyA glyA argD argD patB patB gcvP1 gcvP1 selA selA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
serCSerC; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (361 aa)
hisC2HisC2; Histidinol-phosphate aminotransferase HisC (Imidazole acetol- phosphate transaminase); Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (368 aa)
ACN13546.1Putative 4-aminobutyrate aminotransferase. (79 aa)
ACN14501.1Aminotransferase family protein. (380 aa)
ACN14525.1Tungsten-containing aldehyde ferredoxin oxidoreductase. (1052 aa)
hisC1HisC1; Histidinol-phosphate aminotransferase HisC; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (377 aa)
hemLHemL; Glutamate-1-semialdehyde 2,1-aminomutase HemL. (428 aa)
aspC3AspC3; Aspartate aminotransferase (Transaminase A) (AspAT). (441 aa)
ACN16811.1Pyridoxal-dependent decarboxylase family protein. (554 aa)
hisC3HisC3; Histidinol-phosphate aminotransferase HisC (Imidazole acetol-phosphate transaminase). (438 aa)
gabTGabT; 4-aminobutyrate aminotransferase GabT; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (435 aa)
aspC4AspC4; Aminotransferase AspC (transaminase A) (ASPAT). (372 aa)
iscS2IscS2; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. (385 aa)
rocD2RocD2; Ornithine aminotransferase RocD; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (435 aa)
aspC1AspC1; Aspartate aminotransferase AspC (Transaminase A) (ASPAT). (444 aa)
aspC5AspC5; Aspartate aminotransferase AspC. (389 aa)
ACN17622.1Putative histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase. (371 aa)
ACN13435.1Aminotransferase, DegT/DnrJ/EryC1-family protein; Belongs to the DegT/DnrJ/EryC1 family. (399 aa)
arnBArnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB; Belongs to the DegT/DnrJ/EryC1 family. (386 aa)
ltaELtaE; Low specificity L-threonine aldolase LtaE. (334 aa)
aspC2AspC2; Aspartate aminotransferase AspC. (394 aa)
bioFBioF; 7-keto-8-aminopelargonate synthetase BioF. (406 aa)
ACN13932.1Aminotransferase, class V (putative purine catabolism protein PucG). (359 aa)
gcvP2GcvP2; Glycine cleavage system, dehydrogenase subunit GcvP2. (495 aa)
dapLPredicted aspartate aminotransferase (transaminase A) (AspAT); Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate. (409 aa)
ACN13133.1Putative aminotransferase. (404 aa)
rocD1RocD1; Ornithine aminotransferase RocD; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (395 aa)
mdeAMdeA; Methionine gamma-lyase MdeA (L-methionase). (401 aa)
iscS1IscS1; Cysteine desulfurase IscS (aminotransferase, class V; NifS homolog protein). (380 aa)
ACN16221.1Putative aspartate/tyrosine/aromatic acid aminotransferase. (394 aa)
glyAGlyA; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (416 aa)
argDArgD; Acetylornithine/succinyldiaminopimelate aminotransferase ArgD (ACOAT); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (391 aa)
patBPatB; PLP-dependent aminotransferase PatB. (401 aa)
gcvP1GcvP1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. (443 aa)
selASelA; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. (470 aa)
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: low (10%) [HD]