STRINGSTRING
DP0150 DP0150 clpB clpB DP1890 DP1890 pstB pstB DP1837 DP1837 DP1784 DP1784 DP1754 DP1754 DP1694 DP1694 lolD lolD DP1544 DP1544 DP1540 DP1540 DP1446 DP1446 DP1437 DP1437 dnaX dnaX DP1394 DP1394 DP1389 DP1389 DP1363 DP1363 DP1352 DP1352 DP1271 DP1271 DP1270 DP1270 DP1247 DP1247 DP1235 DP1235 DP1229 DP1229 DP1208 DP1208 DP1178 DP1178 DP1177 DP1177 DP1103 DP1103 DP1040 DP1040 DP1033 DP1033 DP1029 DP1029 DP1024 DP1024 DP1000 DP1000 DP0989 DP0989 DP0953 DP0953 DP0896 DP0896 DP0886 DP0886 atpD atpD DP0756 DP0756 radA radA DP0709 DP0709 DP0681 DP0681 DP0635 DP0635 DP0563 DP0563 DP0539 DP0539 DP0513 DP0513 DP0500 DP0500 DP0482 DP0482 DP0477 DP0477 DP0470 DP0470 DP0466 DP0466 DP0455 DP0455 DP0441 DP0441 DP0402 DP0402 DP0378 DP0378 DP0376 DP0376 DP0355 DP0355 DP0345 DP0345 DP0337 DP0337 DP0329 DP0329 DP0318 DP0318 dnaA dnaA DP0216 DP0216 DP0206 DP0206 DP0080 DP0080 DP0081 DP0081 lon1 lon1 DP1953 DP1953 DP0151 DP0151 DPPB14 DPPB14 DP3102 DP3102 ftsH ftsH DP3061 DP3061 DP3056 DP3056 DP2978 DP2978 recA recA DP2921 DP2921 DP2823 DP2823 rho rho DP2721 DP2721 hslU hslU DP2659 DP2659 DP2648 DP2648 msbA msbA DP2599 DP2599 ftsE ftsE clpX clpX lon2 lon2 DP2525 DP2525 DP2524 DP2524 DP2487 DP2487 DP2486 DP2486 DP2381 DP2381 DP2313 DP2313 DP2287 DP2287 DP2268 DP2268 DP2241 DP2241 DP2235 DP2235 DP2226 DP2226 DP2185 DP2185 DP2108 DP2108 DP1987 DP1987 DP1984 DP1984 DP1959 DP1959
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DP0150Probable dipeptide ABC transporter, ATP-binding protein (DppD); Belongs to the ABC transporter superfamily. (322 aa)
clpBProbable heat shock protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (868 aa)
DP1890Related to ABC transporter, ATP-binding protein. (833 aa)
pstBProbable phosphate ABC transporter, ATP-binding protein (PstB); Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (293 aa)
DP1837Probable ABC transporter, ATP-binding protein. (256 aa)
DP1784Probable lipoprotein releasing system, ATP-binding protein (LolD). (251 aa)
DP1754Probable ABC transporter. (249 aa)
DP1694Probable twitching mobility protein. (360 aa)
lolDRelated to lipoprotein releasing system ATP-binding protein (LolD); Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (224 aa)
DP1544Probable ABC transporter, ATP-binding protein. (564 aa)
DP1540Conserved hypothetical protein. (446 aa)
DP1446Probable two-component system response regulator (Ntr family). (454 aa)
DP1437Probable amino acid ABC transporter, ATP-binding protein. (258 aa)
dnaXRelated to DNA polymerase III, subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (269 aa)
DP1394Related to putrescine ABC transporter, ATP-binding protein (PotG). (380 aa)
DP1389Related to transcriptional regulator. (600 aa)
DP1363Probable ABC transporter, ATP-binding protein. (250 aa)
DP1352Related to ABC transporter, ATP-binding protein. (362 aa)
DP1271Probable high-affinity branched-chain amino acid ABC transporter, ATP-binding protein. (242 aa)
DP1270Probable high-affinity branched-chain amino acid ABC transporter, ATP-binding protein. (252 aa)
DP1247Related to ABC transporter, ATP-binding protein. (669 aa)
DP1235Probable glutamine ABC transporter, ATP-binding protein. (242 aa)
DP1229Probable phosphate ABC-transporter, ATP binding protein; Belongs to the ABC transporter superfamily. (233 aa)
DP1208Related to ABC transporter, ATP-binding protein. (550 aa)
DP1178Probable oligopeptide ABC transporter, ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family. (619 aa)
DP1177Probable oligopeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily. (306 aa)
DP1103Related to cell division protein (FtsK). (705 aa)
DP1040Probable two-component system response regulator (Ntr family). (454 aa)
DP1033Probable uncharacterized ATPase related to the helicase subunit of the Holliday junction resolvase. (440 aa)
DP1029Probable amino acid ABC transporter, ATP-binding protein. (269 aa)
DP1024Probable two-component system response regulator (Ntr family). (481 aa)
DP1000Related to ABC transporter, ATP-binding protein. (612 aa)
DP0989Probable amino acid permease, ATP-binding protein. (244 aa)
DP0953Probable two-component system response regulator (Ntr family). (443 aa)
DP0896Probable twitching mobility protein. (389 aa)
DP0886Probable ATP-dependent Clp protease, ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. (750 aa)
atpDProbable ATP synthase, beta chain (AtpB); Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family. (471 aa)
DP0756Probable ABC transporter, ATP-binding protein. (246 aa)
radAProbable DNA repair protein (RadA); DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (451 aa)
DP0709Related to nitrogen fixation protein (AnfA). (517 aa)
DP0681Probable sugar ABC transporter, ATP-binding protein. (495 aa)
DP0635Probable transcriptional regulator (MoxR). (355 aa)
DP0563Related to ABC transporter, ATP-binding protein. (347 aa)
DP0539Related to sigma-54 transcriptional regulator. (463 aa)
DP0513Related to toxin secretion ATP-binding protein. (716 aa)
DP0500Probable ABC transporter, ATP-binding protein. (256 aa)
DP0482Related to sigma54-dependent transcriptional regulator. (630 aa)
DP0477Probable sigma-54-dependent transcriptional regulator. (477 aa)
DP0470Related to two-component system response regulator (Ntr family). (465 aa)
DP0466Probable molybdenum ABC-transporter, ATP-binding protein. (226 aa)
DP0455Probable molybdenum ABC-transporter, ATP-binding protein (ModC); Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family. (347 aa)
DP0441Probable ABC transporter, ATP-binding protein. (240 aa)
DP0402Hypothetical ATP-binding protein. (427 aa)
DP0378Related to sugar ABC transporter, ATP-binding protein. (266 aa)
DP0376Probable two-component system response regulator (Ntr family). (443 aa)
DP0355Probable transcriptional regulator. (574 aa)
DP0345Probable molybdenum ABC transporter, ATP-binding protein (ModF). (459 aa)
DP0337Probable transcription regulator (HydG). (457 aa)
DP0329Related to ABC transporter, ATP-binding protein. (344 aa)
DP0318Probable ABC transporter, ATP-binding protein. (236 aa)
dnaARelated to chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. (487 aa)
DP0216Probable Fe(III) ABC transporter, ATP-binding protein. (282 aa)
DP0206Probable glycine betaine/L-proline transport ATP-binding protein (ProV). (421 aa)
DP0080Related to ABC transporter, multidrug resistance-like ATP-binding protein (MdlA). (589 aa)
DP0081Related to ABC transporter, ATP-binding protein. (602 aa)
lon1Probable ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (808 aa)
DP1953Related to bifunctional cobalamin biosynthesis protein (CobP); Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. (179 aa)
DP0151Probable dipeptide ABC transporter, ATP-binding protein (DppF); Belongs to the ABC transporter superfamily. (337 aa)
DPPB14Probable conjugal transfer protein TrbE. (904 aa)
DP3102Probable ABC transporter, ATP-binding protein. (264 aa)
ftsHProbable cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (684 aa)
DP3061Related to Mn/Zn ABC transporter, ATP-binding protein. (258 aa)
DP3056Probable transcriptional regulatory protein (HydG). (474 aa)
DP2978Related to iron (III) ABC transporter, ATP-binding protein. (447 aa)
recAProbable RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (355 aa)
DP2921Probable ATP-dependent protease La. (489 aa)
DP2823Related to two-component system response regulator (Ntr family). (454 aa)
rhoProbable transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (416 aa)
DP2721Related to two-component system response regulator (Ntr family). (460 aa)
hslUProbable ATP-dependent protease, ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. (457 aa)
DP2659Probable flagellum-specific ATP synthase (FliI). (434 aa)
DP2648Related to two-component system response regulator (Ntr family). (531 aa)
msbARelated to ABC-transporter, ATP-binding protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (572 aa)
DP2599Probable replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (468 aa)
ftsEProbable cell division ATP-binding protein (FtsE); Part of the ABC transporter FtsEX involved in cellular division. (233 aa)
clpXProbable ATP-dependent Clp protease, ATPase subunit (ClpX); ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (419 aa)
lon2Probable ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (774 aa)
DP2525Probable ABC transporter, ATP-binding protein. (515 aa)
DP2524Related to ABC transporter, ATP-binding protein. (542 aa)
DP2487Probable high-affinity branched-chain amino acid ABC transporter, ATP-binding protein. (258 aa)
DP2486Probable high-affinity branched-chain amino acid ABC transporter, ATP-binding protein. (250 aa)
DP2381Hypothetical protein. (868 aa)
DP2313Related to hydrogenase-4 transcriptional activator. (546 aa)
DP2287Related to ABC transporter, ATP-binding protein. (247 aa)
DP2268Probable competence protein ComM. (501 aa)
DP2241Related to transcription activator Stc. (657 aa)
DP2235Related to two-component system response regulator (Ntr family). (478 aa)
DP2226Probable type IV pilus assembly protein (TapB). (743 aa)
DP2185Probable ABC transporter, ATP-binding protein. (561 aa)
DP2108Related to ATP-binding secretion protein. (757 aa)
DP1987Related to 5' to 3' DNA helicase. (820 aa)
DP1984Probable glutamine ABC-transporter, ATP-binding protein (GlnQ). (243 aa)
DP1959Related to two-component system response regulator (Ntr family). (453 aa)
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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