STRINGSTRING
OBJ88286.1 OBJ88286.1 OBJ86538.1 OBJ86538.1 dnaK dnaK OBJ79319.1 OBJ79319.1 rho rho OBJ81066.1 OBJ81066.1 OBJ81737.1 OBJ81737.1 OBJ82616.1 OBJ82616.1 rnj rnj eno eno OBJ85147.1 OBJ85147.1 OBJ86130.1 OBJ86130.1 OBJ86335.1 OBJ86335.1 deaD deaD ppk ppk OBJ75216.1 OBJ75216.1 OBJ78868.1 OBJ78868.1 OBJ78864.1 OBJ78864.1 OBJ78790.1 OBJ78790.1 OBJ78746.1 OBJ78746.1 OBJ78780.1 OBJ78780.1 pnp pnp OBJ78097.1 OBJ78097.1 OBJ78110.1 OBJ78110.1 OBJ77466.1 OBJ77466.1 OBJ76441.1 OBJ76441.1 OBJ75884.1 OBJ75884.1 OBJ74887.1 OBJ74887.1 OBJ91983.1 OBJ91983.1 OBJ90234.1 OBJ90234.1 OBJ90239.1 OBJ90239.1 OBJ89295.1 OBJ89295.1 groEL groEL OBJ88712.1 OBJ88712.1 OBJ87992.1 OBJ87992.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OBJ88286.1Type VII secretion-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
OBJ86538.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (391 aa)
dnaKMolecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. (622 aa)
OBJ79319.1DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)
rhoTranscription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. (664 aa)
OBJ81066.1Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (995 aa)
OBJ81737.1NYN domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
OBJ82616.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)
rnjRibonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. (558 aa)
enoPhosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (429 aa)
OBJ85147.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (174 aa)
OBJ86130.1Phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
OBJ86335.1Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology. (598 aa)
deaDCold-shock protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. (581 aa)
ppkRNA degradosome polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. (733 aa)
OBJ75216.1DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (923 aa)
OBJ78868.1Metal-dependent phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)
OBJ78864.1NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. (155 aa)
OBJ78790.1Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
OBJ78746.1DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. (504 aa)
OBJ78780.1Polyphosphate kinase 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
pnpPolyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (752 aa)
OBJ78097.1CCA tRNA nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (483 aa)
OBJ78110.1Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (183 aa)
OBJ77466.1NYN domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
OBJ76441.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (494 aa)
OBJ75884.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
OBJ74887.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
OBJ91983.1Recombinase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (549 aa)
OBJ90234.1Molecular chaperone Hsp70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heat shock protein 70 family. (509 aa)
OBJ90239.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
OBJ89295.13'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (434 aa)
groELMolecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. (397 aa)
OBJ88712.1Cobalamin biosynthesis protein CobW; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
OBJ87992.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (610 aa)
Your Current Organism:
Mycobacterium gordonae
NCBI taxonomy Id: 1778
Other names: ATCC 14470, CCUG 21801, CCUG 21811, CIP 104529, DSM 44160, JCM 6382, M. gordonae, NCTC 10267
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