STRINGSTRING
WN55_05290 WN55_05290 WN55_05426 WN55_05426 WN55_07633 WN55_07633 WN55_11124 WN55_11124 WN55_00137 WN55_00137 WN55_00780 WN55_00780 WN55_01558 WN55_01558 WN55_02377 WN55_02377 WN55_03567 WN55_03567 WN55_03956 WN55_03956 WN55_05687 WN55_05687
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WN55_05290Ras-related protein Rab-8A. (209 aa)
WN55_05426Protein prenyltransferase alpha subunit repeat-containing protein 1. (426 aa)
WN55_07633Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. (299 aa)
WN55_11124Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. (598 aa)
WN55_00137Geranylgeranyl transferase type-2 subunit alpha. (542 aa)
WN55_00780Ras-related protein Rab-26. (290 aa)
WN55_01558Ras-related protein Rab-39B. (218 aa)
WN55_02377Ras-related protein Rab-1A. (203 aa)
WN55_03567Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (491 aa)
WN55_03956Ras-related protein Rab-32. (675 aa)
WN55_05687Ras-related protein Rab-8A. (208 aa)
Your Current Organism:
Dufourea novaeangliae
NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae
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