15 items (Dufourea novaeangliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WN55_02152	Exocyst complex component 1. (850 aa)
	WN55_05289	Uncharacterized protein. (449 aa)
	WN55_09744	Exocyst complex component 4. (159 aa)
	WN55_05801	Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family. (1048 aa)
	WN55_04716	Hyaluronidase. (638 aa)
	WN55_08191	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. (890 aa)
	WN55_11337	Ras-related protein Rab-11A. (215 aa)
	WN55_11103	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (684 aa)
	WN55_00197	Ras-related protein Rab-10. (200 aa)
	WN55_01296	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (804 aa)
	WN55_01890	Ras-related protein RabJ. (1113 aa)
	WN55_02375	Exocyst complex component 5. (693 aa)
	WN55_03225	Rab11 family-interacting protein 4A. (518 aa)
	WN55_05264	Guanine nucleotide exchange factor for Rab-3A. (433 aa)
	WN55_07256	Exocyst complex component 8. (713 aa)

Your Current Organism:

Dufourea novaeangliae

NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WN55_00197	WN55_01296	A0A154PCA5	A0A154PCZ2	Ras-related protein Rab-10.	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.840
WN55_00197	WN55_02152	A0A154PCA5	A0A154NXD1	Ras-related protein Rab-10.	Exocyst complex component 1.	0.801
WN55_00197	WN55_02375	A0A154PCA5	A0A154PHG7	Ras-related protein Rab-10.	Exocyst complex component 5.	0.805
WN55_00197	WN55_03225	A0A154PCA5	A0A154PKZ4	Ras-related protein Rab-10.	Rab11 family-interacting protein 4A.	0.557
WN55_00197	WN55_04716	A0A154PCA5	A0A154P1H0	Ras-related protein Rab-10.	Hyaluronidase.	0.484
WN55_00197	WN55_05264	A0A154PCA5	A0A154PPA0	Ras-related protein Rab-10.	Guanine nucleotide exchange factor for Rab-3A.	0.898
WN55_00197	WN55_07256	A0A154PCA5	A0A154PRT0	Ras-related protein Rab-10.	Exocyst complex component 8.	0.722
WN55_00197	WN55_08191	A0A154PCA5	A0A154P6I6	Ras-related protein Rab-10.	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	0.804
WN55_00197	WN55_09744	A0A154PCA5	A0A154NZ40	Ras-related protein Rab-10.	Exocyst complex component 4.	0.813
WN55_00197	WN55_11103	A0A154PCA5	A0A154PC15	Ras-related protein Rab-10.	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.755
WN55_00197	WN55_11337	A0A154PCA5	A0A154PBP8	Ras-related protein Rab-10.	Ras-related protein Rab-11A.	0.750
WN55_01296	WN55_00197	A0A154PCZ2	A0A154PCA5	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Ras-related protein Rab-10.	0.840
WN55_01296	WN55_01890	A0A154PCZ2	A0A154PF39	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Ras-related protein RabJ.	0.767
WN55_01296	WN55_02152	A0A154PCZ2	A0A154NXD1	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 1.	0.997
WN55_01296	WN55_02375	A0A154PCZ2	A0A154PHG7	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 5.	0.999
WN55_01296	WN55_03225	A0A154PCZ2	A0A154PKZ4	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Rab11 family-interacting protein 4A.	0.710
WN55_01296	WN55_04716	A0A154PCZ2	A0A154P1H0	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Hyaluronidase.	0.672
WN55_01296	WN55_05264	A0A154PCZ2	A0A154PPA0	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Guanine nucleotide exchange factor for Rab-3A.	0.942
WN55_01296	WN55_05289	A0A154PCZ2	A0A154NXY6	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Uncharacterized protein.	0.840
WN55_01296	WN55_07256	A0A154PCZ2	A0A154PRT0	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 8.	0.998