80 items (Dufourea novaeangliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WN55_00369	Alpha-tocopherol transfer protein-like. (800 aa)
	WN55_01420	Gamma-secretase subunit pen-2. (101 aa)
	WN55_02266	Sphingolipid delta(4)-desaturase DES1; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily. (321 aa)
	WN55_01558	Ras-related protein Rab-39B. (218 aa)
	WN55_01623	Phosphoinositide 3-kinase regulatory subunit 4. (1359 aa)
	WN55_01606	Lysosome-associated membrane glycoprotein 5. (311 aa)
	WN55_00629	Leucine-rich repeat serine/threonine-protein kinase 1. (2403 aa)
	WN55_02699	Vesicle-associated membrane protein 7; Belongs to the synaptobrevin family. (221 aa)
	WN55_09742	Sorting nexin-16. (248 aa)
	WN55_09615	Protein FAM45B. (352 aa)
	WN55_01259	Proactivator polypeptide. (941 aa)
	WN55_00641	Clavesin-2. (469 aa)
	WN55_02775	Major facilitator superfamily domain-containing protein 12. (407 aa)
	WN55_02755	Lysosome-associated membrane glycoprotein 1. (1567 aa)
	WN55_02658	Battenin. (421 aa)
	WN55_02039	Mucolipin-3. (628 aa)
	WN55_04219	Uncharacterized protein. (231 aa)
	WN55_07155	Ras-related protein Rab-7a. (207 aa)
	WN55_05816	Ras-related protein Rab-14. (218 aa)
	WN55_04685	Vacuolar protein sorting-associated protein 41 like protein. (729 aa)
	WN55_05807	Type II inositol 1,4,5-trisphosphate 5-phosphatase. (844 aa)
	WN55_02732	NEDD4 family-interacting protein 1-like. (231 aa)
	WN55_06188	Alpha-tocopherol transfer protein. (289 aa)
	WN55_01661	Protein Star. (312 aa)
	WN55_01642	Major facilitator superfamily domain-containing protein 12. (439 aa)
	WN55_02617	BAI1-associated protein 3. (906 aa)
	WN55_02343	Charged multivesicular body protein 1b. (197 aa)
	WN55_01644	Pleckstrin homology domain-containing family F member 2. (253 aa)
	WN55_02646	BAI1-associated protein 3. (360 aa)
	WN55_02817	Scavenger receptor class B member 1; Belongs to the CD36 family. (575 aa)
	WN55_01579	StAR-related lipid transfer protein 3. (477 aa)
	WN55_02305	Vacuolar fusion protein MON1 like protein A. (519 aa)
	WN55_03603	Charged multivesicular body protein 4b. (221 aa)
	WN55_03647	Chloride channel protein. (780 aa)
	WN55_07583	Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (212 aa)
	WN55_10237	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (521 aa)
	WN55_07736	WD repeat-containing protein 81. (874 aa)
	WN55_08327	Ragulator complex protein LAMTOR1. (151 aa)
	WN55_08357	Vacuolar protein-sorting-associated protein 36. (402 aa)
	WN55_08318	Protein wntless. (512 aa)
	WN55_08294	Charged multivesicular body protein 6. (209 aa)
	WN55_09892	Vacuolar protein sorting-associated protein VTA1 like protein. (285 aa)
	WN55_07735	Putative inactive serine/threonine-protein kinase lvsG. (1066 aa)
	WN55_09215	Protein Star. (214 aa)
	WN55_09889	Ras-related protein Rab-9A. (231 aa)
	WN55_11444	Gamma-secretase subunit Aph-1. (238 aa)
	WN55_11255	Charged multivesicular body protein 3. (221 aa)
	WN55_11403	Uncharacterized protein. (1116 aa)
	WN55_00789	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (167 aa)
	WN55_00934	Vacuolar fusion protein CCZ1 like protein. (463 aa)
	WN55_02856	Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family. (612 aa)
	WN55_03484	Neurogenic locus Notch protein. (479 aa)
	WN55_03933	Protein HBXIP like protein. (91 aa)
	WN55_03485	Neurogenic locus Notch protein. (2280 aa)
	WN55_04148	Vacuolar protein sorting-associated protein 13C. (664 aa)
	WN55_04149	Vacuolar protein sorting-associated protein 13A. (2766 aa)
	WN55_05970	Charged multivesicular body protein 5. (221 aa)
	WN55_05463	Lysosome-associated membrane glycoprotein 1. (176 aa)
	WN55_05235	Uncharacterized protein C18orf8. (670 aa)
	WN55_05927	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. (1149 aa)
	WN55_04974	Spermatogenesis-defective protein 39 like protein. (422 aa)
	WN55_06684	Uncharacterized protein. (256 aa)
	WN55_05130	E3 ubiquitin-protein ligase MARCH8. (443 aa)
	WN55_06691	Alpha-tocopherol transfer protein-like. (328 aa)
	WN55_05011	Beta-hexosaminidase. (661 aa)
	WN55_06023	Protein CLEC16A. (972 aa)
	WN55_00266	Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P). (256 aa)
	WN55_06934	Vacuolar protein sorting-associated protein 13C. (803 aa)
	WN55_06689	Alpha-tocopherol transfer protein-like. (309 aa)
	WN55_07440	Vesicle transport through interaction with t-SNAREs like protein 1A. (219 aa)
	WN55_07756	Pleckstrin homology domain-containing family M member 3. (646 aa)
	WN55_01931	Charged multivesicular body protein 7. (449 aa)
	WN55_00791	Protein spinster. (660 aa)
	WN55_00530	Vacuolar protein sorting-associated protein 35. (806 aa)
	WN55_00875	Ankyrin repeat domain-containing protein 13B. (608 aa)
	WN55_01497	Ragulator complex protein LAMTOR3-A. (121 aa)
	WN55_01463	Nicastrin. (670 aa)
	WN55_01990	Phosphatidylinositol 4-kinase type 2-beta. (468 aa)
	WN55_01972	WD repeat-containing protein 91. (643 aa)
	WN55_00398	Magnesium-dependent phosphatase 1. (156 aa)

Your Current Organism:

Dufourea novaeangliae

NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WN55_00369	WN55_05927	A0A154PFM2	A0A154PPP9	Alpha-tocopherol transfer protein-like.	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family.	0.529
WN55_00398	WN55_01931	A0A154PFI9	A0A154PEC2	Magnesium-dependent phosphatase 1.	Charged multivesicular body protein 7.	0.805
WN55_00398	WN55_02343	A0A154PFI9	A0A154PHG2	Magnesium-dependent phosphatase 1.	Charged multivesicular body protein 1b.	0.802
WN55_00398	WN55_03603	A0A154PFI9	A0A154PIW9	Magnesium-dependent phosphatase 1.	Charged multivesicular body protein 4b.	0.806
WN55_00398	WN55_04219	A0A154PFI9	A0A154NVZ8	Magnesium-dependent phosphatase 1.	Uncharacterized protein.	0.550
WN55_00398	WN55_05970	A0A154PFI9	A0A154PNF8	Magnesium-dependent phosphatase 1.	Charged multivesicular body protein 5.	0.810
WN55_00398	WN55_08294	A0A154PFI9	A0A154P6S2	Magnesium-dependent phosphatase 1.	Charged multivesicular body protein 6.	0.802
WN55_00398	WN55_08357	A0A154PFI9	A0A154P6M4	Magnesium-dependent phosphatase 1.	Vacuolar protein-sorting-associated protein 36.	0.552
WN55_00398	WN55_09892	A0A154PFI9	A0A154P7I8	Magnesium-dependent phosphatase 1.	Vacuolar protein sorting-associated protein VTA1 like protein.	0.550
WN55_00398	WN55_11255	A0A154PFI9	A0A154PBN0	Magnesium-dependent phosphatase 1.	Charged multivesicular body protein 3.	0.647
WN55_00530	WN55_00629	A0A154PEM6	A0A154NZP0	Vacuolar protein sorting-associated protein 35.	Leucine-rich repeat serine/threonine-protein kinase 1.	0.761
WN55_00530	WN55_00789	A0A154PEM6	A0A154PCM9	Vacuolar protein sorting-associated protein 35.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.999
WN55_00530	WN55_01623	A0A154PEM6	A0A154PGF4	Vacuolar protein sorting-associated protein 35.	Phosphoinositide 3-kinase regulatory subunit 4.	0.529
WN55_00530	WN55_02305	A0A154PEM6	A0A154PI96	Vacuolar protein sorting-associated protein 35.	Vacuolar fusion protein MON1 like protein A.	0.468
WN55_00530	WN55_02699	A0A154PEM6	A0A154NZA9	Vacuolar protein sorting-associated protein 35.	Vesicle-associated membrane protein 7; Belongs to the synaptobrevin family.	0.483
WN55_00530	WN55_04148	A0A154PEM6	A0A154PLF3	Vacuolar protein sorting-associated protein 35.	Vacuolar protein sorting-associated protein 13C.	0.552
WN55_00530	WN55_04149	A0A154PEM6	A0A154PLH2	Vacuolar protein sorting-associated protein 35.	Vacuolar protein sorting-associated protein 13A.	0.552
WN55_00530	WN55_05463	A0A154PEM6	A0A154PP75	Vacuolar protein sorting-associated protein 35.	Lysosome-associated membrane glycoprotein 1.	0.517
WN55_00530	WN55_05816	A0A154PEM6	A0A154P250	Vacuolar protein sorting-associated protein 35.	Ras-related protein Rab-14.	0.509
WN55_00530	WN55_06934	A0A154PEM6	A0A154PRH2	Vacuolar protein sorting-associated protein 35.	Vacuolar protein sorting-associated protein 13C.	0.552