26 items (Dufourea novaeangliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WN55_02375	Exocyst complex component 5. (693 aa)
	WN55_03743	Syntaxin-binding protein 5. (1344 aa)
	WN55_03341	Protein sly1 like protein; Belongs to the STXBP/unc-18/SEC1 family. (629 aa)
	WN55_08191	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. (890 aa)
	WN55_08318	Protein wntless. (512 aa)
	WN55_05769	Golgin subfamily A member 4. (872 aa)
	WN55_08946	Protein dopey-1 like protein. (2406 aa)
	WN55_10268	ADP-ribosylation factor-binding protein GGA1. (656 aa)
	WN55_05816	Ras-related protein Rab-14. (218 aa)
	WN55_05862	ADP-ribosylation factor-related protein 1. (205 aa)
	WN55_05861	AP-1 complex subunit gamma. (802 aa)
	WN55_09744	Exocyst complex component 4. (159 aa)
	WN55_02152	Exocyst complex component 1. (850 aa)
	WN55_04232	Golgin-45. (437 aa)
	WN55_01296	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (804 aa)
	WN55_11052	Coiled-coil domain-containing protein 93. (574 aa)
	WN55_11327	Brefeldin A-inhibited guanine nucleotide-exchange protein 2. (1643 aa)
	WN55_07715	Vacuolar protein sorting-associated protein 52 like protein. (667 aa)
	WN55_07303	Golgin subfamily A member 7. (140 aa)
	WN55_07440	Vesicle transport through interaction with t-SNAREs like protein 1A. (219 aa)
	WN55_07256	Exocyst complex component 8. (713 aa)
	WN55_05927	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. (1149 aa)
	WN55_01940	Guanine nucleotide exchange factor MSS4 like protein. (119 aa)
	WN55_01005	Golgi phosphoprotein 3. (305 aa)
	WN55_00353	Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family. (160 aa)
	WN55_02225	Vesicle-fusing ATPase 1; Belongs to the AAA ATPase family. (663 aa)

Your Current Organism:

Dufourea novaeangliae

NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WN55_00353	WN55_05862	A0A154PFI5	A0A154P0J0	Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family.	ADP-ribosylation factor-related protein 1.	0.862
WN55_01296	WN55_01940	A0A154PCZ2	A0A154PF70	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Guanine nucleotide exchange factor MSS4 like protein.	0.680
WN55_01296	WN55_02152	A0A154PCZ2	A0A154NXD1	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 1.	0.997
WN55_01296	WN55_02375	A0A154PCZ2	A0A154PHG7	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 5.	0.999
WN55_01296	WN55_03341	A0A154PCZ2	A0A154PMR4	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Protein sly1 like protein; Belongs to the STXBP/unc-18/SEC1 family.	0.493
WN55_01296	WN55_03743	A0A154PCZ2	A0A154PK40	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Syntaxin-binding protein 5.	0.649
WN55_01296	WN55_05816	A0A154PCZ2	A0A154P250	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Ras-related protein Rab-14.	0.703
WN55_01296	WN55_07256	A0A154PCZ2	A0A154PRT0	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 8.	0.998
WN55_01296	WN55_08191	A0A154PCZ2	A0A154P6I6	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	0.998
WN55_01296	WN55_09744	A0A154PCZ2	A0A154NZ40	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	Exocyst complex component 4.	0.998
WN55_01940	WN55_01296	A0A154PF70	A0A154PCZ2	Guanine nucleotide exchange factor MSS4 like protein.	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.680
WN55_01940	WN55_09744	A0A154PF70	A0A154NZ40	Guanine nucleotide exchange factor MSS4 like protein.	Exocyst complex component 4.	0.457
WN55_01940	WN55_11327	A0A154PF70	A0A154PBP1	Guanine nucleotide exchange factor MSS4 like protein.	Brefeldin A-inhibited guanine nucleotide-exchange protein 2.	0.510
WN55_02152	WN55_01296	A0A154NXD1	A0A154PCZ2	Exocyst complex component 1.	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.	0.997
WN55_02152	WN55_02375	A0A154NXD1	A0A154PHG7	Exocyst complex component 1.	Exocyst complex component 5.	0.997
WN55_02152	WN55_03743	A0A154NXD1	A0A154PK40	Exocyst complex component 1.	Syntaxin-binding protein 5.	0.572
WN55_02152	WN55_05816	A0A154NXD1	A0A154P250	Exocyst complex component 1.	Ras-related protein Rab-14.	0.668
WN55_02152	WN55_07256	A0A154NXD1	A0A154PRT0	Exocyst complex component 1.	Exocyst complex component 8.	0.997
WN55_02152	WN55_07715	A0A154NXD1	A0A154P7J8	Exocyst complex component 1.	Vacuolar protein sorting-associated protein 52 like protein.	0.561
WN55_02152	WN55_08191	A0A154NXD1	A0A154P6I6	Exocyst complex component 1.	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.	0.999