18 items (Dufourea novaeangliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WN55_08294	Charged multivesicular body protein 6. (209 aa)
	WN55_10241	Protein SEC13 like protein; Belongs to the WD repeat SEC13 family. (311 aa)
	WN55_09669	Wiskott-Aldrich syndrome protein. (556 aa)
	WN55_00645	Peflin. (179 aa)
	WN55_05294	Protein transport protein Sec24B. (795 aa)
	WN55_05054	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (775 aa)
	WN55_05927	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. (1149 aa)
	WN55_04012	Fragile X mental retardation syndrome-related protein 1. (643 aa)
	WN55_05970	Charged multivesicular body protein 5. (221 aa)
	WN55_03471	Dynamin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (871 aa)
	WN55_03603	Charged multivesicular body protein 4b. (221 aa)
	WN55_02970	Phosphatidylinositol-binding clathrin assembly protein LAP. (865 aa)
	WN55_02234	Protein transport protein Sec24C. (1326 aa)
	WN55_01005	Golgi phosphoprotein 3. (305 aa)
	WN55_01931	Charged multivesicular body protein 7. (449 aa)
	WN55_11255	Charged multivesicular body protein 3. (221 aa)
	WN55_10996	ADP-ribosylation factor GTPase-activating protein 2. (536 aa)
	WN55_09877	Protein transport protein Sec31A. (1224 aa)

Your Current Organism:

Dufourea novaeangliae

NCBI taxonomy Id: 178035
Other names: D. novaeangliae, Dufourea nova-angliae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
WN55_00645	WN55_09877	A0A154P0A3	A0A154P778	Peflin.	Protein transport protein Sec31A.	0.778
WN55_00645	WN55_10241	A0A154P0A3	A0A154P387	Peflin.	Protein SEC13 like protein; Belongs to the WD repeat SEC13 family.	0.402
WN55_01005	WN55_05054	A0A154PF86	A0A154PNS4	Golgi phosphoprotein 3.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.481
WN55_01931	WN55_03603	A0A154PEC2	A0A154PIW9	Charged multivesicular body protein 7.	Charged multivesicular body protein 4b.	0.981
WN55_01931	WN55_05970	A0A154PEC2	A0A154PNF8	Charged multivesicular body protein 7.	Charged multivesicular body protein 5.	0.906
WN55_01931	WN55_08294	A0A154PEC2	A0A154P6S2	Charged multivesicular body protein 7.	Charged multivesicular body protein 6.	0.933
WN55_01931	WN55_11255	A0A154PEC2	A0A154PBN0	Charged multivesicular body protein 7.	Charged multivesicular body protein 3.	0.946
WN55_02234	WN55_05054	A0A154PFW8	A0A154PNS4	Protein transport protein Sec24C.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.999
WN55_02234	WN55_05294	A0A154PFW8	A0A154NY46	Protein transport protein Sec24C.	Protein transport protein Sec24B.	0.993
WN55_02234	WN55_09877	A0A154PFW8	A0A154P778	Protein transport protein Sec24C.	Protein transport protein Sec31A.	0.984
WN55_02234	WN55_10241	A0A154PFW8	A0A154P387	Protein transport protein Sec24C.	Protein SEC13 like protein; Belongs to the WD repeat SEC13 family.	0.998
WN55_02970	WN55_03471	A0A154PHP6	A0A154PJG1	Phosphatidylinositol-binding clathrin assembly protein LAP.	Dynamin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	0.662
WN55_02970	WN55_05927	A0A154PHP6	A0A154PPP9	Phosphatidylinositol-binding clathrin assembly protein LAP.	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family.	0.782
WN55_02970	WN55_10241	A0A154PHP6	A0A154P387	Phosphatidylinositol-binding clathrin assembly protein LAP.	Protein SEC13 like protein; Belongs to the WD repeat SEC13 family.	0.448
WN55_03471	WN55_02970	A0A154PJG1	A0A154PHP6	Dynamin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Phosphatidylinositol-binding clathrin assembly protein LAP.	0.662
WN55_03471	WN55_05927	A0A154PJG1	A0A154PPP9	Dynamin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family.	0.667
WN55_03471	WN55_09669	A0A154PJG1	A0A154P163	Dynamin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.	Wiskott-Aldrich syndrome protein.	0.723
WN55_03603	WN55_01931	A0A154PIW9	A0A154PEC2	Charged multivesicular body protein 4b.	Charged multivesicular body protein 7.	0.981
WN55_03603	WN55_05970	A0A154PIW9	A0A154PNF8	Charged multivesicular body protein 4b.	Charged multivesicular body protein 5.	0.991
WN55_03603	WN55_08294	A0A154PIW9	A0A154P6S2	Charged multivesicular body protein 4b.	Charged multivesicular body protein 6.	0.993